Bioconductor Protein

Showing : protein • reset

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603

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protein database glutathionylation PTM

3.6 years ago Camelia • 0

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1.3k

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microarray normalization protein

updated 4.2 years ago by Wolfgang Huber ★ 13k • written 5.6 years ago by keniajin • 0

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1.5k

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Gviz protein visualization UcscTrack protein domains

updated 4.4 years ago by James W. MacDonald 67k • written 4.4 years ago by paul.jaschke ▴ 10

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1.2k

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microarray protein analysis ProteomeProfiler

updated 4.9 years ago by Gordon Smyth 52k • written 4.9 years ago by hcnbox • 0

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3.1k

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STRINGdb R protein

updated 5.7 years ago by zhanghongjie000 • 0 • written 5.8 years ago by shahroze786 • 0

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1.0k

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Protein iranges sequencing

5.9 years ago ieuangw • 0

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1.2k

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protein disease pathway analysis pathways

6.5 years ago ረ • 0

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1.2k

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dnaseq pathway analysis protein biomarkers

7.0 years ago emadelhewihy • 0

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1.1k

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R blast blastsequences protein

7.0 years ago andres.susrud • 0

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1.6k

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biostrings iranges sequence alignment protein

updated 8.0 years ago by Michael Lawrence ★ 11k • written 8.0 years ago by Assa Yeroslaviz ★ 1.5k

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2.6k

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biostrings fasta protein

updated 8.0 years ago by James W. MacDonald 67k • written 8.0 years ago by fastabest • 0

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2.6k

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xcms convert protein

updated 8.1 years ago by Johannes Rainer ★ 2.1k • written 8.1 years ago by ray.bacala • 0

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1.3k

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bioinformatics protein variantannotation data integration Job

8.2 years ago stephan.pabinger • 0

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1.6k

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iranges biostrings fasta protein readaastringset

updated 8.3 years ago by Michael Lawrence ★ 11k • written 8.3 years ago by Assa Yeroslaviz ★ 1.5k

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1.9k

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protein vcf

9.8 years ago dan.gatti • 0

15 results • Page 1 of 1

Recent ...

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Answer: Selection of correct coefficients or contrasts in DESeq2 by swbarnes2 ★ 1.4k

I think you need to include the design you used, and the command you used to call it. The simplest answer is that your two ways of doing t…

Comment: Csaw normalization strategies - general inquiry by Luca • 0

Hello Aaron, About the IP efficiencies, yes definitely and for us, to complicate this experiment further, these batches were generated by …

Comment: How to compare expression levels of genes between scRNAseq and bulkRNAseq? by Quang NN ▴ 10

Thank you ATpoint for your response. In bulkRNAseq, I did have two cell types to compare. But, I want to also see if bulkRNAseq might have …

Answer: Why select top highly expressed genes based on normalized counts, but then plot by ATpoint ★ 4.6k

The choice of variable genes is typically part of a QC process. You select genes that in an unbiased fashion (unbiased because variance cal…

Comment: How to compare expression levels of genes between scRNAseq and bulkRNAseq? by ATpoint ★ 4.6k

My take is that RNA-seq (be it bulk or single-cell) is inherently relative. I don't think you can really "compare" the absolute expression …

Votes

Answer: Csaw normalization strategies - general inquiry

A: DESeq2 interaction term

Comment: Recount3 data correspond to TCGA data

Answer: DESeq2- merging technical vs biological replicates

Answer: SingleCellExperiment convenience function for metadata+expression?

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