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Answer: Behaviour of featureCounts when quantifying multi-mapping reads
by
Yang Liao
▴
400
Both `v1.5.0` and `v1.6.4` versions are very old. I suggest upgrading to `v2.0.6` (the latest version).
There was a change regarding the `…
Comment: Error: no such table: main.gene2pubmed when running makeOrgPackageFromNCBI() fr
by
Ozan
•
0
Sounds good. Thanks again!
Comment: Error: no such table: main.gene2pubmed when running makeOrgPackageFromNCBI() fr
by
James W. MacDonald
66k
Ah, ok. Doesn't really matter though. Try using `UniProt.ws`.
Comment: Error: no such table: main.gene2pubmed when running makeOrgPackageFromNCBI() fr
by
Ozan
•
0
I believe my `NCBI.sqlite` database is located in the same directory, but for some reason it seems to be empty. Even in the File explorer i…
Comment: Error: no such table: main.gene2pubmed when running makeOrgPackageFromNCBI() fr
by
James W. MacDonald
66k
You have to do that in the directory that contains your NCBI.sqlite database.
```
> library(RSQLite)
> con <- dbConnect(SQLite(), "thisfil…
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