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blast
•
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0
votes
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replies
388
views
Visualize blastx output in R
blast
16 months ago
kvigil
• 0
1
vote
2
replies
1.4k
views
blastn for selected database and/or organism
blast
blastsequences
updated 6.1 years ago by
James W. MacDonald
66k • written 6.1 years ago by
aush
▴ 40
0
votes
0
replies
947
views
batch blast matrix of protein sequences from R
R
blast
blastsequences
protein
6.4 years ago
andres.susrud
• 0
1
vote
2
replies
2.2k
views
blastSequences queries failing due to BLAST switch to https?
annotate
blastSequences
BLAST
https
updated 7.7 years ago by
Martin Morgan
25k • written 7.7 years ago by
ariel.hecht
• 0
3
votes
8
replies
8.4k
views
Which package to run blast
blast
updated 7.8 years ago by
Malcolm Cook
★ 1.6k • written 7.8 years ago by
biomiha
▴ 20
0
votes
0
replies
860
views
After mapping one Sanger sequence read (about 900bp) to hg19 using blastn, How can I get variants presented as reference-based position and base ch…
Biostrings
blast
variantannotation
7.8 years ago
li lilingdu
▴ 450
0
votes
1
reply
1.5k
views
Primer-blast with bioconductor packages
primer
blast
updated 8.1 years ago by
Hervé Pagès
16k • written 8.1 years ago by
Vinicius Henrique da Silva
▴ 40
0
votes
5
replies
5.6k
views
Blastp - through R
blast
R
8.4 years ago
maahpishanu
• 0
4
votes
13
replies
4.5k
views
How to create an output file with sequence ID's from multiple BLAST result using blastSequences in "Biostrings"
annotation
blast
biostrings
updated 8.9 years ago by
Martin Morgan
25k • written 8.9 years ago by
Mathilde
• 0
2
votes
2
replies
1.9k
views
BLAST export library 'annotate'
blast
annotate
biostrings
export
fasta
9.6 years ago
b.stielow
• 0
4
votes
3
replies
4.9k
views
Use R/Bioconductor to match BLAST hits to GO terms?
GO
BLAST
annotation
updated 9.7 years ago by
Marc Carlson
★ 7.2k • written 9.7 years ago by
Jon Bråte
▴ 250
11 results • Page
1 of 1
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Answer: GESA with certain gene list returns no result with human genom, but many result
by
James W. MacDonald
66k
Ideally you would use something better than gene symbols for this. I realize that biologists like gene symbols, but they are really terribl…
Comment: Single Cell Experiment : Differential Expression "List of length 0" - Help!
by
vohara4
• 0
"label" refers to my clusters, so there shouldn't be one. Both samples have cells in every cluster
Comment: Installing Bioconductor packages in Docker
by
Jon Bråte
▴ 250
How do you run your image after this? I need to specify a password...
Comment: Single Cell Experiment : Differential Expression "List of length 0" - Help!
by
ATpoint
★ 4.2k
What is the relationship between side and label?
Comment: Single Cell Experiment : Differential Expression "List of length 0" - Help!
by
vohara4
• 0
Thank you so much for your response. I've just tried adding Side to the summed object in both of the following manners, but I still get a "…
Votes
A: Scaling option in fastMNN
Answer: Behaviour of featureCounts when quantifying multi-mapping reads
Answer: Behaviour of featureCounts when quantifying multi-mapping reads
A: How to do a confounding variable adjustment without using the treatment informat
Answer: Behaviour of featureCounts when quantifying multi-mapping reads
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