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dnaseq
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0
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689
views
Compare DNA sequence pairs and compute lengths and coordinates
DNASeq
CNEr
2.5 years ago
Md Abrar
• 0
0
votes
4
replies
3.2k
views
transformation of csv file to fasta format with biostrings and r studio
DNASeq
rstudio
fasta
Biostrings
csv
2.9 years ago
HELEN
• 0
0
votes
0
replies
723
views
Job:
Computational postdoctoral fellow for cancer disparities research (Boston University)
DNASeq
RNASeq
SingleCell
2.9 years ago
camp
▴ 10
0
votes
0
replies
644
views
Error in fragEnds[, 1] : incorrect number of dimensions while using printWigFile function in Basic4Cseq package
GenomicInteractions
Basic4Cseq
DNASeq
GenomicFiles
3.0 years ago
koushik
• 0
0
votes
0
replies
992
views
Doubt about the interpretation of cn.mops tumor vs normal results
cn.mops
dnaseq
bioinformatics
5.9 years ago
Cased
• 0
2
votes
3
replies
1.5k
views
Doubt about WL in cn.mops
dnacopy
dnaseq
genomic
cn.mops
cnv
updated 6.0 years ago by
Günter Klambauer
▴ 540 • written 6.0 years ago by
Cased
• 0
0
votes
1
reply
1.1k
views
How to identify Disease biomarkers " DNA sequences as biomarkers "
dnaseq
pathway analysis
protein
biomarkers
6.4 years ago
emadelhewihy
• 0
0
votes
1
reply
1.2k
views
why merged paired end reads still have strand infomation?
dnaseq
rtracklayer
paired-end reads
7.0 years ago
zwfanwz678
• 0
0
votes
0
replies
1.1k
views
Centipede foot printing export
footprinting
centipede
atac-seq
dnaseq
7.3 years ago
rbronste
▴ 60
0
votes
0
replies
1.2k
views
any ideas on a workflow for exome seq data analysis with R?
exome
dnaseq
WES
8.1 years ago
arvand.akbari
• 0
0
votes
0
replies
1.8k
views
Job:
Bioinformatics Analyst at University of Cambridge, Cancer Research UK Cambridge Institute
job
jobs
rnaseq
chipseq
dnaseq
Job
8.8 years ago
Rory Stark
★ 5.2k
3
votes
2
replies
1.4k
views
Get a complete view of a long DNA sequence of a Biostrings object in R
biostrings
subsetting
View
dnastring
dnaseq
updated 8.9 years ago by
James W. MacDonald
66k • written 8.9 years ago by
arado1
• 0
0
votes
1
reply
1.5k
views
Newbie - Adding Labels to Individual Genes with ggbio?
r
ggbio
ggplot2
dnaseq
genomicranges
updated 9.0 years ago by
arfranco
▴ 130 • written 9.0 years ago by
fathniz
• 0
8
votes
9
replies
6.3k
views
ChIPseq-style peak calling for paired-end sequencing?
Chipseq
DNAseq
ATAC
bayespeak
narrowpeaks
updated 9.1 years ago by
Gordon Smyth
51k • written 9.1 years ago by
samuel collombet
▴ 140
9
votes
8
replies
9.0k
views
DEseq2 extended to open chromatin anlaysis: normalization, dispersion fit, and "too many" differences
deseq2
dnaseq
updated 9.8 years ago by
Michael Love
42k • written 9.8 years ago by
hughes.drew
▴ 100
1
vote
0
replies
1.5k
views
Bioconductor Employment: Statistical Research Associate
DNASeq
Cancer
DNASeq
Cancer
12.6 years ago
Martin Morgan
25k
16 results • Page
1 of 1
Recent ...
Replies
Comment: Ranking the GSEA Results
by
Lluís Revilla Sancho
▴ 730
You can have the ranking without the cutoff. If you don't keep any gene set after the cutoff then there is nothing to rank as you said, so…
Answer: Create a Graph w/ Only the Genes Interaction
by
Antonio
• 0
Thank you all, I solved my issue by creating a for loop. Cheers!
Comment: Ranking the GSEA Results
by
alserg
▴ 270
Apparently, it sends a notification to the developer on a new message after the tags were updated :) but not the change of tags itself
Comment: Ranking the GSEA Results
by
alserg
▴ 270
Where did you see ranking of genes by `log2FC * (-log10 p-value)`? I don't think I ever saw one and not sure what it should achieve. Aren't…
Comment: Trouble Installing DADA2 (warning: R new user)
by
shepherl
3.9k
As far as this ERROR for Bioc requires R version, Bioconductor is closely tied to an R release. Depending if you tried to use a premade s…
Votes
Comment: Ranking the GSEA Results
Error in `$<-.data.frame`(`*tmp*`, "dispersion", value = NA)
ChiPseeker package: plotAnnoPie identical colors for peakAnnoList features
Comment: How to get the DMR?
Answer: Using both voom and removeBatchEffect, will they double adjust the data or is it
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ATpoint
★ 4.2k
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to
WouterDeCoster
▴ 130
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Gordon Smyth
51k
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Chris
▴ 20
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Jitendra
▴ 10
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