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ComplexHeatmap's UpSet plots: how to convert a binary matrix into a list of sets
ComplexHeatmap UpSet
4.8 years ago moldach ▴ 20
0
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0
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3.0k
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Comment: C: Reverse translate from protein sequences into the most likely non-degenrate DNA
4.9 years ago moldach ▴ 20
0
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1
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3.0k
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Comment: C: Reverse translate from protein sequences into the most likely non-degenrate DNA
4.9 years ago moldach ▴ 20
0
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4
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3.0k
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Reverse translate from protein sequences into the most likely non-degenrate DNA coding sequence
biostrings
4.9 years ago moldach ▴ 20
0
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2
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1.0k
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Does biovizBase contain a genesymbol data set for other model organisms?
biovizBase ggbio
updated 5.0 years ago by 68k • written 5.0 years ago by ▴ 20
0
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1
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2.3k
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Comment: C: Error: no applicable method for `RunTSNE` applied to an object of class "try-err
5.4 years ago moldach ▴ 20
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3
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2.3k
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Error: no applicable method for `RunTSNE` applied to an object of class "try-error"
Seurat scRNA debugging exceptions unit-test
updated 5.4 years ago by 25k • written 5.4 years ago by ▴ 20
4
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1
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1.5k
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could not find function "plotQC" in scater package
scater
updated 5.5 years ago by ★ 28k • written 5.5 years ago by ▴ 20
0
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8
replies
4.1k
views
Getting data into (and out of) the MSnSet object
proteomics MSnbase MSnSet readMSnSet msmsTests
updated 5.6 years ago by • 0 • written 7.2 years ago by ▴ 20
0
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2
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2.6k
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ChAMP::champ.norm Error in champ.BMIQ(beta[, x], design.v, sampleID = colnames(beta)[x], : task 1 failed - "only defined on a data frame with all…
ChAMP methylation BMIQ
updated 17 months ago by • 0 • written 5.9 years ago by ▴ 20
0
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0
replies
860
views
Error for ENmix::bmiq.mc() on one sample
ENmix
6.1 years ago moldach ▴ 20
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0
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1.4k
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Error in ENmix::bmiq.mc(): BMIQ estimates encountered error, try to run it again
methylation ENmix BMIQ wateRmelon
6.2 years ago • updated 6.1 years ago moldach ▴ 20
1
vote
2
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2.3k
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Minfi read.metharray.sheet error
minfi methylation dataimport minfidata missmethyl
updated 6.6 years ago by 68k • written 6.6 years ago by ▴ 20
0
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1
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1.9k
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Comment: C: Trouble using addMarkers from pRoloc on my own dataset
7.2 years ago moldach ▴ 20
0
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2
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1.9k
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Comment: C: Trouble using addMarkers from pRoloc on my own dataset
7.2 years ago moldach ▴ 20
1
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0
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1.7k
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Comment: C: Using Human Protein Atlas annotations with pRoloc to interpretate subcellular lo
7.2 years ago moldach ▴ 20
0
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2
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1.7k
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Comment: C: Using Human Protein Atlas annotations with pRoloc to interpretate subcellular lo
7.2 years ago moldach ▴ 20
0
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0
replies
951
views
How to get proteins which are associated with a specific pathway of interest and subset iRefIndex files which contain the relevant interactions
Path2PPI
7.2 years ago moldach ▴ 20
0
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5
replies
1.9k
views
Trouble using addMarkers from pRoloc on my own dataset
proloc proteomics msnset
7.2 years ago moldach ▴ 20
1
vote
4
replies
1.7k
views
Using Human Protein Atlas annotations with pRoloc to interpretate subcellular location
pRoloc annotation subcellular location
updated 7.2 years ago by 1.6k • written 7.2 years ago by ▴ 20
0
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1
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4.1k
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Answer: A: Getting data into (and out of) the MSnSet object
7.2 years ago moldach ▴ 20
0
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1
reply
4.1k
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Comment: C: Getting data into (and out of) the MSnSet object
7.2 years ago moldach ▴ 20
0
votes
1
reply
4.1k
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Comment: C: Getting data into (and out of) the MSnSet object
7.2 years ago moldach ▴ 20
0
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0
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3.1k
views
Comment: C: Bioconductor vignette on Time course experiments only describes how to plot the
9.5 years ago moldach ▴ 20
0
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1
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1.9k
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DESeq2 design issues - specifically understanding contrasts & interactions from page 23-25 of the DESeq2 manual
deseq2 design and contrast matrix interactions contrast
updated 9.5 years ago by 43k • written 9.5 years ago by ▴ 20
0
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1
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3.1k
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Answer: A: Bioconductor vignette on Time course experiments only describes how to plot the
9.6 years ago moldach ▴ 20
3
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4
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3.1k
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Bioconductor vignette on Time course experiments only describes how to plot the the gene with the smallest p-value. How can I plot specific genes of …
timecourse time course rna-seq deseq2 ggplot2
9.6 years ago moldach ▴ 20
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