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proloc
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Job:
Open position in the CBIO lab: spatial proteomics and PTMs
pRoloc
proteomics
Spatial
Proteomics
MassSpectrometry
15 months ago
Laurent Gatto
1.6k
0
votes
1
reply
720
views
pROLOC phenoDisco running extra interations, but not finishing cluster analysis
pRoloc
phenoDisco
updated 4.4 years ago by
Laurent Gatto
1.6k • written 4.4 years ago by
dave.g.rattray
• 0
1
vote
1
reply
1.0k
views
pRoloc - phenoDisco - issue with example
pRoloc
phenoDisco
fcol
updated 4.8 years ago by
Laurent Gatto
1.6k • written 4.9 years ago by
johnscrn
• 0
1
vote
4
replies
1.4k
views
Problems with cholesky decomposition in pRoloc package
pRoloc
machine learning
cholesky
5.3 years ago
robinkretz
• 0
2
votes
6
replies
1.4k
views
Error in parameter setting using svmOptimisation for pRoloc analysis
bioconductor
proloc
updated 6.2 years ago by
Laurent Gatto
1.6k • written 6.3 years ago by
sjp221
• 0
0
votes
5
replies
1.6k
views
Trouble using addMarkers from pRoloc on my own dataset
proloc
proteomics
msnset
6.4 years ago
moldach
▴ 20
1
vote
4
replies
1.3k
views
Using Human Protein Atlas annotations with pRoloc to interpretate subcellular location
pRoloc
annotation
subcellular location
updated 6.4 years ago by
Laurent Gatto
1.6k • written 6.4 years ago by
moldach
▴ 20
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Comment: Odd behavior of Rsubread::featureCounts when setting `nonOverlap = 0`
by
isaac.vock
• 0
Thank you for looking into this and for your explanation! As a follow-up, would it be possible in future releases of featureCounts to pro…
Comment: error loading collectTRI regulon
by
silvaesilva.da
• 0
Fantastic. Thank you very much. Everything has been sorted out
Answer: DESeq2 returns results for group with just one replicate
by
James W. MacDonald
66k
There is no problem having only one replicate per group, so long as you have replicates for other groups. The degrees of freedom are based …
Answer: Limma model.matrix design with batch effect and different life stages proportion
by
Masongeorge
• 0
Thanks for this post. i found it helpful for my own issue that was occurring on the backend of this page.
Comment: error loading collectTRI regulon
by
deeenes
▴ 50
I fixed the original, Ensembl HTTP 403 error only now, [see here][1]. If you've seen it gone earlier today, only shows that this error appe…
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Answer: Odd behavior of Rsubread::featureCounts when setting `nonOverlap = 0`
Answer: DESeq2 returns results for group with just one replicate
Answer: DESeq2 returns results for group with just one replicate
Comment: error loading collectTRI regulon
A: Scaling option in fastMNN
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