Bioconductor Cnv

Showing : cnv • reset

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1.3k

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TCGAbiolinks cnv

3.1 years ago • updated 3.0 years ago raf4 ▴ 30

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2.0k

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MEDIP-seq CNV TCGA450KHumanMethylationCalibrationDataset qsea PRAD

3.5 years ago rtrivedi1 ▴ 10

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695

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exomeCopy CNV WES

3.6 years ago Cheng • 0

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3.8k

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gaia cnv

updated 3.2 years ago by juanmafernandezm86 • 0 • written 6.3 years ago by rina ▴ 30

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1.1k

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copywriter cnv

updated 4.6 years ago by oscarkrijgsman ▴ 20 • written 4.6 years ago by Ram ▴ 220

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842

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cn.mops panelcn.mops CNV detection CNV

4.7 years ago metzgerlukas • 0

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602

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CNV cn.mops undef

4.7 years ago ankita.narang86 • 0

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875

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cn.MOPS CNV copy number

4.8 years ago liorglic ▴ 10

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955

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PureCN CNV CNA segmentation calculateTangentNormal

updated 4.9 years ago by markus.riester ▴ 130 • written 4.9 years ago by sruddy17 • 0

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920

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cnv R plot visualization cn.mops software error

5.0 years ago ari • 0

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720

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ExomeDepth CNV

5.0 years ago Bouzid.a ▴ 20

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1.0k

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cnv cn.mops singlecn.mops

updated 2.7 years ago by SicilianSilicon • 0 • written 5.0 years ago by frez111 • 0

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1.4k

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PureCN Germline Normal CNV

updated 6.2 years ago by markus.riester ▴ 130 • written 6.2 years ago by twtoal ▴ 10

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2.8k

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tcgabiolinks tcga cnv mac os x gaia

updated 6.3 years ago by rreck ▴ 20 • written 6.3 years ago by rina ▴ 30

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1.7k

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dnacopy dnaseq genomic cn.mops cnv

updated 6.4 years ago by Günter Klambauer ▴ 540 • written 6.4 years ago by Cased • 0

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1.0k

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tcgabiolinks tcga cnv noise pruning

6.4 years ago jrlarsen ▴ 10

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1.4k

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PureCN Purity Low Purity CNV

6.5 years ago twtoal ▴ 10

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1.1k

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read counting CNV rsamtools

updated 6.7 years ago by James W. MacDonald 67k • written 6.7 years ago by Bogdan ▴ 670

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1.2k

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conumee CNV 450K

6.8 years ago bird.of.clockwise • 0

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951

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CNV

6.9 years ago Bogdan ▴ 670

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1.2k

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exomecopy cnv

6.9 years ago ramakrishnas • 0

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1.6k

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cn.mops cnv

updated 6.9 years ago by Günter Klambauer ▴ 540 • written 6.9 years ago by martyferr90 ▴ 20

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1.5k

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CNV WGS WES

updated 7.4 years ago by Haiying.Kong ▴ 110 • written 7.4 years ago by Bogdan ▴ 670

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1.1k

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cnv genomic ranges cnvs

7.4 years ago julrodr80 ▴ 30

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1.2k

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cnv genes genomic ranges splitByOverlap

updated 7.6 years ago by Martin Morgan 25k • written 7.6 years ago by julrodr80 ▴ 30

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1.4k

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CNV minfi preprocessing dna methylation

7.7 years ago Thomas • 0

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2.6k

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cn.mops cnv targeted sequencing

updated 7.9 years ago by Günter Klambauer ▴ 540 • written 7.9 years ago by Bouzid.a ▴ 20

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1.4k

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CNV

8.2 years ago Bogdan ▴ 670

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1.1k

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genomicranges R cnv

8.3 years ago WouterDeCoster ▴ 130

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1.4k

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cnv cnvtools crlmm

8.3 years ago enriquev • 0

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1.8k

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copynumber cnvtools cnv copywriteR

updated 8.3 years ago by t.kuilman ▴ 170 • written 8.3 years ago by ahinsahr11 • 0

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1.6k

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cnv exome

8.7 years ago Bio152 ▴ 150

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1.8k

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cnv nexus for oncoscan Affymetrix 6.0 .BGR

8.8 years ago IOM ▴ 20

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1.8k

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CNV cn.mops

updated 8.9 years ago by Günter Klambauer ▴ 540 • written 8.9 years ago by ashkot09 • 0

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2.0k

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CNV cn.mops

updated 8.9 years ago by Günter Klambauer ▴ 540 • written 8.9 years ago by ashkot09 • 0

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1.4k

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cnv exomecopy

updated 9.0 years ago by Michael Love 43k • written 9.0 years ago by cafelumiere12 ▴ 20

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1.5k

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GVF CNV cnvGSA

updated 9.1 years ago by James W. MacDonald 67k • written 9.1 years ago by Vinicius Henrique da Silva ▴ 40

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1.2k

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NGScopy installation CNV

9.3 years ago JstRoRR • 0

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1.9k

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cn.mops cnv cnvtools

updated 9.4 years ago by Günter Klambauer ▴ 540 • written 9.4 years ago by voksdvoks • 0

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2.6k

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cn.mops cnv cnvtools

updated 9.4 years ago by Martin Morgan 25k • written 9.4 years ago by bioconductor • 0

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1.4k

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cnv genomeinfodb

9.4 years ago voksdvoks • 0

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1.7k

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TCGA CNV

updated 9.5 years ago by Marc Carlson ★ 7.2k • written 9.5 years ago by NS ▴ 60

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1.6k

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SNP6 crlmm vanillaice vanillaice crlmm cnv

updated 9.5 years ago by rscharpf • 0 • written 9.5 years ago by cafelumiere12 ▴ 20

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3.5k

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SNP CNV TCGA

9.6 years ago NS ▴ 60

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1.5k

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SNP DNAcopy SNP6.0 CNV

9.8 years ago giovanni.dario • 0

45 results • Page 1 of 1

Recent ...

Replies

Answer: Deseq2 res Function by Michael Love 43k

> Does this mean the young and KO groups were numerators and denominators in the analysis, respectively? Read over the vignette and work…

Answer: ANOVA like approach of edgeR by Gordon Smyth 51k

You need to clarify whether interactions are present for the two factors in your study. In the two factors do not interact, then the code y…

Answer: Create Illmina bead summary data by Gordon Smyth 51k

GenomeStudio produces IDAT files that you can read using the `read.idat` function in limma. That is the recommended way to read GenomeStudi…

Comment: Help with RSEM counts: do I transpose matrix? by NB • 0

OK thank you.

Comment: Help with RSEM counts: do I transpose matrix? by James W. MacDonald 67k

You can ask here, but please read the `DESeq2` vignette first, which should answer most questions.

Votes

Answer: Deseq2 res Function

Answer: BiocNeighbours Utility for k-Nearest Neighbour Classification

Answer: ANOVA like approach of edgeR

Comment: ANOVA like approach of edgeR

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