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copywriter
•
reset
0
votes
2
replies
347
views
Error in if (nrow(peaks) > 0) { : argument is of length zero Calls: CopywriteR ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous> Execution h…
CopywriteR
CopyhelpeR
10 weeks ago • updated 9 weeks ago
fer_talavera
• 0
0
votes
1
reply
578
views
CopywriteR output
CopywriteR
updated 9 weeks ago by
fer_talavera
• 0 • written 2.6 years ago by
Joshua
• 0
2
votes
4
replies
934
views
CopywriteR job runs out of memory
copywriter
cnv
updated 4.1 years ago by
oscarkrijgsman
▴ 20 • written 4.1 years ago by
Ram
▴ 210
0
votes
1
reply
923
views
CopywriteR - low coverage-regions display very low numbers
copywriter
copynumber
updated 5.7 years ago by
t.kuilman
▴ 170 • written 5.7 years ago by
magdaaverte
• 0
3
votes
12
replies
2.1k
views
S4Vectors and subectHits error
s4vectors
copywriter
updated 6.2 years ago by
Michael Lawrence
★ 11k • written 6.2 years ago by
TriS
▴ 200
1
vote
2
replies
1.8k
views
BiocParallel and CopywriteR Error
bioconductor
biocparallel
copywriter
updated 6.9 years ago by
Martin Morgan
25k • written 6.9 years ago by
genomic8328
▴ 10
0
votes
1
reply
1.1k
views
Problems with CopywriteR
copywriter
updated 7.2 years ago by
t.kuilman
▴ 170 • written 7.2 years ago by
filipzembol
• 0
0
votes
1
reply
1.6k
views
CopywriteR: CNV calling on normals samples / gaps in chromosomes
copynumber
cnvtools
cnv
copywriteR
updated 7.9 years ago by
t.kuilman
▴ 170 • written 7.9 years ago by
ahinsahr11
• 0
0
votes
3
replies
1.4k
views
CopywriteR error: "Error in .Method"
CopywriteR
7.9 years ago
Tom
▴ 10
1
vote
3
replies
1.4k
views
CopywriteR can't finish calculating copy number
copywriter
bam
updated 8.0 years ago by
t.kuilman
▴ 170 • written 8.0 years ago by
thestaroceanster
• 0
3
votes
3
replies
3.9k
views
Preparing CopywriteR output for GISTIC 2.0 analysis
copywriter
updated 8.3 years ago by
t.kuilman
▴ 170 • written 8.3 years ago by
jcarter
• 0
2
votes
4
replies
2.4k
views
Visualizing CopywriteR's segmentation output in IGV
copywriter
dnacopy
updated 8.3 years ago by
t.kuilman
▴ 170 • written 8.3 years ago by
jcarter
• 0
1
vote
2
replies
1.3k
views
Copywriter output looks strange
copywriter
8.3 years ago
MatthewGField
▴ 10
2
votes
9
replies
2.5k
views
Calling amplifications and deletions from CopywriteR output
CopywriteR
copy number
updated 8.3 years ago by
t.kuilman
▴ 170 • written 8.4 years ago by
smcnulty
• 0
0
votes
7
replies
2.1k
views
Multithreading CopywriteR on SLURM cluster
copywriter
slurm
openMPI
updated 8.3 years ago by
t.kuilman
▴ 170 • written 8.3 years ago by
smcnulty
• 0
0
votes
1
reply
1.4k
views
CopywriteR - choosing optimal bin size for targeted sequencing panel
copywriter
bin size
targeted sequencing
updated 8.3 years ago by
t.kuilman
▴ 170 • written 8.3 years ago by
sshung
• 0
2
votes
1
reply
1.3k
views
Copyhelper: Preprocession of mappability
CopywriteR
updated 8.4 years ago by
t.kuilman
▴ 170 • written 8.4 years ago by
Felix
• 0
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Comment: error loading collectTRI regulon
by
silvaesilva.da
• 0
Fantastic. Thank you very much. Everything has been sorted out
Answer: DESeq2 returns results for group with just one replicate
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James W. MacDonald
66k
There is no problem having only one replicate per group, so long as you have replicates for other groups. The degrees of freedom are based …
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Masongeorge
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Thanks for this post. i found it helpful for my own issue that was occurring on the backend of this page.
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▴ 50
I fixed the original, Ensembl HTTP 403 error only now, [see here][1]. If you've seen it gone earlier today, only shows that this error appe…
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Ideally you would use something better than gene symbols for this. I realize that biologists like gene symbols, but they are really terribl…
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Answer: DESeq2 returns results for group with just one replicate
Answer: DESeq2 returns results for group with just one replicate
Comment: error loading collectTRI regulon
A: Scaling option in fastMNN
Answer: Behaviour of featureCounts when quantifying multi-mapping reads
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