Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
Volcanoplot
•
reset
0
votes
4
replies
1.3k
views
Volcano plot becomes flipped when I add a third condition
DESeq2
volcanoplot
deseq
HELP
contrast
updated 15 months ago by
Basti
▴ 780 • written 15 months ago by
Michael
• 0
0
votes
1
reply
805
views
part of the volcano plot does not appear.
plot
volcano
volcanoplot
updated 15 months ago by
Basti
▴ 780 • written 15 months ago by
Sooni
▴ 10
0
votes
1
reply
600
views
Assigning the name of top 100 DE transcripts/genes to Volcano plot
limma
DEGreport
Volcanoplot
updated 17 months ago by
Gordon Smyth
50k • written 17 months ago by
Mohammad
• 0
3
votes
5
replies
2.1k
views
Volcano plot - select additional gene
EnhancedVolcano
RNASeqR
R
volcanoplot
updated 3.6 years ago by
Kevin Blighe
★ 3.9k • written 3.6 years ago by
camillab.
▴ 10
1
vote
5
replies
2.4k
views
Why the p value and logFC calculated by limma is so small
limma
volcanoplot
pvalue
logFC
updated 5.2 years ago by
Gordon Smyth
50k • written 5.2 years ago by
xingxd16
▴ 20
0
votes
4
replies
6.9k
views
Limma Volcano Plot Highlight Top Genes by Color
limma
microarray
volcanoplot
color
updated 5.6 years ago by
Gordon Smyth
50k • written 5.6 years ago by
dmm204
• 0
2
votes
4
replies
7.3k
views
Volcano Plot (highlighting top genes in a different color)
volcanoplot
updated 6.6 years ago by
thokall
▴ 160 • written 6.6 years ago by
Nithisha
▴ 10
0
votes
1
reply
1.1k
views
Pseudo-coloring DiffBind volcano plot
diffbind
chipseq
volcanoplot
ggplot2
updated 6.6 years ago by
Rory Stark
★ 5.2k • written 6.7 years ago by
rbronste
▴ 60
0
votes
2
replies
1.8k
views
Draw volcano plot by modifying contrast matrix (lumi package)
volcanoplot
design and contrast matrix
updated 6.7 years ago by
Gordon Smyth
50k • written 6.7 years ago by
marongiu.luigi
• 0
11
votes
3
replies
9.3k
views
Volcanoplot with limma - RAW P-values or Adj.P-Values
volcanoplot
limma
fdr
6.9 years ago • updated 3.5 years ago
tcalvo
▴ 90
5
votes
4
replies
6.8k
views
Volcano plot labeling troubles
limma
volcanoplot
updated 6.9 years ago by
Gordon Smyth
50k • written 9.6 years ago by
mccallionc403
• 0
0
votes
2
replies
1.2k
views
volcano plot in Limma
limma
volcanoplot
updated 8.1 years ago by
Aaron Lun
★ 28k • written 8.1 years ago by
mheydarpour
▴ 10
7
votes
4
replies
5.8k
views
Gene symbols on MA-plot
limma
plot.MA
volcanoplot
oligo
updated 8.9 years ago by
Gordon Smyth
50k • written 8.9 years ago by
Gabriel Nathan Kaufman, Mr
▴ 60
2
votes
2
replies
3.1k
views
cummeRbund change point size in volcano plot
cummerbund
ggplot2
size
r
volcanoplot
updated 9.5 years ago by
James W. MacDonald
66k • written 9.5 years ago by
ianmisner17
▴ 20
14 results • Page
1 of 1
Recent ...
Replies
Answer: Win 1 of 50 free virtual registrations to BioC Asia 2022 (Dec 1-2, 2022)
by
toniafodakuta
• 0
Philly Sports Shirts offers an outstanding variety of Philadelphia sports apparel that caters to all fans. With their extensive range of t-…
Comment: How to compare subset of samples from VCF files
by
Gordon Smyth
50k
Welcome to Bioconductor support. Did you know that you can delete your old postings if they haven't received an answer yet? Instead of ap…
Comment: How to compare subset of samples from VCF files
by
Marco
• 0
Here's the vcf file as code block ``` ##fileformat=VCFv4.2 ##INFO=<ID=DP,Number=1,Type=Integer,Description="Approximate read depth"> ##FOR…
Comment: Gviz and custom database
by
James W. MacDonald
66k
The vignette for `Gviz` says you can use a `DNAStringSet`, generated using `Biostrings`. Have you tried that?
Comment: Gviz and custom database
by
luigi.faino
• 0
Dear, this is not what I need. I need to transform a fasta sequence in a genome track usable in Gviz. L
Votes
Answer: makeExampleDESeqDataSet using pilot data
Answer: Checking/updating package versions
Answer: Why is longestConsecutive() depreceated in version 2.72 (BioC version 3.19)?
convert data frame of Entrez IDs to Gene Symbols
Answer: LRT, pairwise comparisons and p-value adjustment
Awards
• All
Popular Question
to
Gordon Smyth
50k
Popular Question
to
Marco Blanchette
▴ 30
Popular Question
to
Fred Hutch (Recruiting)
▴ 40
Scholar
to
James W. MacDonald
66k
Popular Question
to
Levi Waldron
★ 1.1k
Locations
• All
The city by the bay,
2 minutes ago
Pakistan,
37 minutes ago
Hong Kong,
1 hour ago
China,
1 hour ago
WEHI, Melbourne, Australia,
1 hour ago
Traffic: 426 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6