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News: Join the Technical Advisory Board
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20 months ago • updated 19 months ago Maria Doyle ▴ 90
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News: Final List of Deprecated Package Bioc 3.9
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News: Bioconductor joins GTN Smörgåsbord online training event, May 22-26, 2023!
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20 months ago Maria Doyle ▴ 90
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News: Registrations are now open for BioC Asia 2022
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2.3 years ago • updated 2.1 years ago Peter Hickey ▴ 740
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News: BioCAsia Virtual Meeting, 15-18 October 2020
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News: New Bioconductor Community Advisory Board Members for 2021
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3.8 years ago Matthew Ritchie ▴ 1000
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News: Join the Bioconductor Community Advisory Board
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News: Early career researchers: nominate to present your work at BVCN virtual conference on microbiome research
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3.9 years ago Matthew Ritchie ▴ 1000
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News: Community engagement and outreach award
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4.2 years ago shepherl 4.1k
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DESeq2 multiple groups comparison issues, incorrect log2FC results in a small proportion of genes
deseq2
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News: Final List of Deprecated Packages for Bioc3.12
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4.2 years ago shepherl 4.1k
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News: BridgeDbR devel package upgraded to BridgeDb 3
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4.2 years ago egon.willighagen ▴ 10
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News: Bioconductor 3.12 db0s, OrgDbs and TxDbs now available
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4.2 years ago kayla.interdonato ▴ 160
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News: Project-wide Code of Conduct statement for Bioconductor
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4.2 years ago Laurent Gatto 1.6k
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News: List of Deprecated Packages for Bioc3.12
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4.3 years ago shepherl 4.1k
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News: New Package Submission Deadline for Bioc Release 3.12
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4.3 years ago shepherl 4.1k
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News: Bioconductor Release 3.12 Schedule Posted
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News: ensembldb EnsDb databases for Ensembl release 101 added to AnnotationHub
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4.3 years ago Johannes Rainer ★ 2.1k
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News: Ensembl 101 hase been released
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4.4 years ago mchakiachvili ▴ 20
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News: James Taylor foundation: scholarships to Biological Data Science 2020 at CSHL
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News: New Package Submission Workflow Updates!
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News: Bioc2020 - Call for BOF/HAK/FAQ Sections
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4.8 years ago • updated 4.5 years ago shepherl 4.1k
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News: Bioc2020 - Call for BOF/HAK/FAQ Sections Still Open
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4.5 years ago shepherl 4.1k
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News: Award Nomination Deadline Monday June 15th!
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4.6 years ago shepherl 4.1k
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News: Scientific or Informatic Technology Advancement Award!
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4.6 years ago shepherl 4.1k
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4.6 years ago shepherl 4.1k
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4.6 years ago shepherl 4.1k
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News: List of Deprecated Packages for Bioc3.12
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4.6 years ago shepherl 4.1k
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News: New Package Bioconductor Award
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4.6 years ago shepherl 4.1k
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News: Support Site Bioconductor Award
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4.6 years ago shepherl 4.1k
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News: Bioc2020 - Virtual Conference Registration
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4.6 years ago shepherl 4.1k
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News: Updated annotation packages
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4.6 years ago kayla.interdonato ▴ 160
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News: Nominations for Bioconductor Awards!
Bioc2020 Bioconductor Awards Recognition News
4.7 years ago • updated 4.6 years ago shepherl 4.1k
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News: Single Package Builder / New Package Submission
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4.6 years ago shepherl 4.1k
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News: Bioconductor Technical Advisory Board Nominees, 2020
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written 4.6 years ago by 25k
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News: Public Calendar of Events
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4.6 years ago shepherl 4.1k
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News: ensembldb EnsDb databases for Ensembl release 100 added to AnnotationHub
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4.6 years ago Johannes Rainer ★ 2.1k
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News: Issues with annotation packages
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4.7 years ago • updated 4.6 years ago kayla.interdonato ▴ 160
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News: Final List of Deprecated Packages for Bioc3.11
software annotation experiment data deprecated News
updated 4.7 years ago by ▴ 160 • written 4.8 years ago by 4.1k
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News: Bioconductor 3.11 OrgDb and TxDb packages now available
annotation news release News
4.7 years ago kayla.interdonato ▴ 160
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953
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News: Ensembl 100 has been released
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4.7 years ago Thomas Maurel ▴ 800
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965
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News: Bioconductor 3.11 is Released!
software bioconductor release packages News
4.7 years ago shepherl 4.1k
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News: BridgeDb build fails due to website unavailability
bridgedbr News
5.1 years ago • updated 4.7 years ago egon.willighagen ▴ 10
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News: Import Deadlines for RELEASE 3.11
release devel deadline bioconductor News
4.7 years ago shepherl 4.1k
10
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News: Professor James Taylor
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4.7 years ago Martin Morgan 25k
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News: Last Day to Submit New Packages for Bioconductor Release 3.11
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4.7 years ago shepherl 4.1k
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News: Bioconductor Community Advisory Board Members
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4.7 years ago Matthew Ritchie ▴ 1000
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News: New Package and New Docker Image Submission Deadline for Bioc Release 3.11
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4.8 years ago shepherl 4.1k
50 results • Page 1 of 1
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Answer: DESeq error: counts matrix should be numeric, currently it has mode: character by ATpoint ★ 4.6k
R thinks your data are characters (e.g. "1", "2", instead of 1, 2) so given that your `counts_data` indeed only contains counts, do: `mo…
Comment: Any tools to convert .gff to .gtf format by ControlF5 • 0
Yes, the Appsierra team recently built a tool to convert .gff to .gtf format. [ControlF5][1] is providing the best software testing service…
Comment: EuroBioC2024 abstract submission is open! by Alan Downey • 0
EuroBioC2024 has opened its abstract submission process, presenting an exciting opportunity for researchers to contribute to groundbreaking…
Comment: ChAMP.DMR error - Error in makeGenomicRatioSetFromMatrix by O'Brien • 0
Consult the ChAMP.DMR documentation for more information on supported array types and expected data formats: https://bioconductor.org/packa…
Answer: combining raw counts and estimated counts by O'Brien • 0
It is possible to combine raw counts from TCGA and estimated counts from GEO datasets (Kalisto pseudoalignment) while mitigating batch effe…
Votes
A: GWAS analysis with Illumina HumanOmni5-4 BeadChip - recommended software and wor
A: GWAS analysis with Illumina HumanOmni5-4 BeadChip - recommended software and wor
A: RNA-seq Normalisation - normalise all samples in experiment or only the ones use
Answer: Can DESeq2's design compensate for sequencing experimental design shortcomings?
Comment: Issues with seqlevelsStyle when making custom txdb objects for genomes/annotatio
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