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News: European Bioconductor Conference 2023 planning
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News: Join the Technical Advisory Board
Bioconductor News Organization
21 months ago • updated 20 months ago Maria Doyle ▴ 100
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8
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News: Final List of Deprecated Package Bioc 3.9
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written 5.8 years ago by 4.1k
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News: Bioconductor joins GTN Smörgåsbord online training event, May 22-26, 2023!
Training Bioconductor Event Community News
21 months ago Maria Doyle ▴ 100
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News: Registrations are now open for BioC Asia 2022
Asia BioCAsia Conferences Events News
2.3 years ago • updated 2.2 years ago Peter Hickey ▴ 750
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News: BioCAsia Virtual Meeting, 15-18 October 2020
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written 4.4 years ago by ▴ 1000
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News: New Bioconductor Community Advisory Board Members for 2021
bioconductoroversight news community BiocVersion
3.8 years ago Matthew Ritchie ▴ 1000
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News: Join the Bioconductor Community Advisory Board
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updated 3.9 years ago by • 0 • written 4.0 years ago by ▴ 1000
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News: Early career researchers: nominate to present your work at BVCN virtual conference on microbiome research
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4.0 years ago Matthew Ritchie ▴ 1000
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News: Community engagement and outreach award
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written 4.6 years ago by 4.1k
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News: SUPPORT SITE UPGRADE TODAY -- PLEASE REFRAIN FROM POSTING
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4.3 years ago shepherl 4.1k
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DESeq2 multiple groups comparison issues, incorrect log2FC results in a small proportion of genes
deseq2
updated 4.2 years ago by 43k • written 4.3 years ago by • 0
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News: Final List of Deprecated Packages for Bioc3.12
annotation software experimentdata deprecated News
4.3 years ago shepherl 4.1k
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News: BridgeDbR devel package upgraded to BridgeDb 3
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4.3 years ago egon.willighagen ▴ 10
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News: Bioconductor 3.12 db0s, OrgDbs and TxDbs now available
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4.3 years ago kayla.interdonato ▴ 160
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News: Project-wide Code of Conduct statement for Bioconductor
Coc code conduct Bioconductor News
4.3 years ago Laurent Gatto 1.6k
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News: List of Deprecated Packages for Bioc3.12
annotation software experiment data deprecated News
4.4 years ago • updated 4.3 years ago shepherl 4.1k
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News: New Package Submission Deadline for Bioc Release 3.12
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4.3 years ago shepherl 4.1k
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News: Bioconductor Release 3.12 Schedule Posted
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4.4 years ago shepherl 4.1k
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News: ensembldb EnsDb databases for Ensembl release 101 added to AnnotationHub
EnsDb ensembldb annotation AnnotationHub News
4.4 years ago Johannes Rainer ★ 2.1k
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News: Ensembl 101 hase been released
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4.4 years ago mchakiachvili ▴ 20
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News: James Taylor foundation: scholarships to Biological Data Science 2020 at CSHL
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4.5 years ago Kasper Daniel Hansen ★ 6.5k
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News: New Package Submission Workflow Updates!
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updated 3.5 years ago by • 0 • written 4.6 years ago by 4.1k
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News: Bioc2020 - Call for BOF/HAK/FAQ Sections
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4.8 years ago • updated 4.6 years ago shepherl 4.1k
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News: Bioc2020 - Call for BOF/HAK/FAQ Sections Still Open
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4.6 years ago shepherl 4.1k
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1.0k
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News: Award Nomination Deadline Monday June 15th!
bioc2020 awards bioconductor recognition News
4.6 years ago shepherl 4.1k
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937
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News: Scientific or Informatic Technology Advancement Award!
bioconductor bioc2020 awards advancement new technology News
4.6 years ago shepherl 4.1k
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News: Long-term contribution award
bioc2020 bioconductor lifetime recognition awards News
4.6 years ago shepherl 4.1k
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1000
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News: Documentation Bioconductor Award
bioconductor bioc2020 award recognition documentation News
4.6 years ago shepherl 4.1k
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1.1k
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News: List of Deprecated Packages for Bioc3.12
deprecated experiment data software annotation News
4.6 years ago shepherl 4.1k
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0
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1.0k
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News: New Package Bioconductor Award
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4.6 years ago shepherl 4.1k
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925
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News: Support Site Bioconductor Award
bioconductor bioc2020 awards recognition News
4.7 years ago shepherl 4.1k
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956
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News: Bioc2020 - Virtual Conference Registration
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4.7 years ago shepherl 4.1k
0
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0
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912
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News: Updated annotation packages
annotation news News
4.7 years ago kayla.interdonato ▴ 160
4
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4.0k
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News: Nominations for Bioconductor Awards!
Bioc2020 Bioconductor Awards Recognition News
4.8 years ago • updated 4.7 years ago shepherl 4.1k
0
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854
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News: Single Package Builder / New Package Submission
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4.7 years ago shepherl 4.1k
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1.1k
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News: Bioconductor Technical Advisory Board Nominees, 2020
tab News
written 4.7 years ago by 25k
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922
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News: Public Calendar of Events
Bioconductor events News
4.7 years ago shepherl 4.1k
1
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0
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1.4k
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News: ensembldb EnsDb databases for Ensembl release 100 added to AnnotationHub
ensembl annotation ensembldb News
4.7 years ago Johannes Rainer ★ 2.1k
1
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1.2k
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News: Issues with annotation packages
annotation news release News
4.7 years ago kayla.interdonato ▴ 160
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3
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1.3k
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News: Final List of Deprecated Packages for Bioc3.11
software annotation experiment data deprecated News
updated 4.8 years ago by ▴ 160 • written 4.8 years ago by 4.1k
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1.2k
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News: Bioconductor 3.11 OrgDb and TxDb packages now available
annotation news release News
4.8 years ago kayla.interdonato ▴ 160
1
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0
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973
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News: Ensembl 100 has been released
biomart ensembl e100 mart news News
4.8 years ago Thomas Maurel ▴ 800
4
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0
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985
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News: Bioconductor 3.11 is Released!
software bioconductor release packages News
4.8 years ago shepherl 4.1k
0
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4
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1.5k
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News: BridgeDb build fails due to website unavailability
bridgedbr News
5.2 years ago • updated 4.8 years ago egon.willighagen ▴ 10
0
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0
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1.1k
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News: Import Deadlines for RELEASE 3.11
release devel deadline bioconductor News
4.8 years ago shepherl 4.1k
10
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0
replies
3.0k
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News: Professor James Taylor
in memoriam News
4.8 years ago Martin Morgan 25k
0
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0
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1.1k
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News: Last Day to Submit New Packages for Bioconductor Release 3.11
deadline new submission bioconductor release News
4.8 years ago shepherl 4.1k
2
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0
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1.1k
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News: Bioconductor Community Advisory Board Members
news bioconductor oversight community News
4.8 years ago Matthew Ritchie ▴ 1000
0
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1
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1.3k
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News: New Package and New Docker Image Submission Deadline for Bioc Release 3.11
release package submission docker deadline News
4.9 years ago • updated 4.8 years ago shepherl 4.1k
50 results • Page 1 of 1
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Comment: Identifying potentially associated gene set to drug response using GSVA by kl2023gege • 0
Thanks for sharing. You gotta check out Sprunki Phase Games on [Sprunki Phase](https://sprunkiphase.net). It's a wild ride of tunes and tw…
Answer: I am having issues with bowtie2_build by James W. MacDonald 67k
Is proof.fa an actual FASTA file? Have you tried using the demo data that comes with the package? See the [vignette under Build Bowtie Inde…
Answer: DEG analysis across multiple timepoints, treatments and tissues by Michael Love 43k
Yes, if you think the entire time course can be modified by tissue effects then you would include another set of interaction terms. I re…
Comment: How to visualize these pathways using pathview by Guido Hooiveld ★ 4.1k
FYI: a similar, if not identical issue has been reported before (`pathview` has problems visualizing some pathways, but not all). You likel…
Comment: Why select top highly expressed genes based on normalized counts, but then plot by Quang NN ▴ 10
I see. Thank you ATpoint!
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Answer: Unable to install nloptr
Answer: ensembldb for Homo Sapiens organism containing superfluous SYMBOL genes?
C: How does edgeR cpm function calculate log(CPM) values?
Answer: Selection of correct coefficients or contrasts in DESeq2
Answer: Selection of correct coefficients or contrasts in DESeq2
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