8 weeks ago • updated 8 days ago
shepherl
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680
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3
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18
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2.9k
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10 months ago • updated 14 days ago
shepherl
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4
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721
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0
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3
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525
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2
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864
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12 months ago • updated 11 months ago
shepherl
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2
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11 months ago
Franck RICHARD
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6
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1.1k
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updated 13 months ago by
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written 14 months ago by
shepherl
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14 months ago
Amanda D. Clark
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17 months ago
Robert Castelo
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564
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2
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751
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18 months ago
shepherl
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19 months ago
shepherl
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656
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3
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810
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updated 23 months ago by
Gordon Smyth
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written 23 months ago by
Jonathan
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0
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4
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1.1k
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2.1 years ago • updated 18 months ago
shepherl
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615
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2.1 years ago
shepherl
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827
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4
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2
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1.2k
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2.6 years ago
Guillaume Devailly
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60
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2
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1.5k
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updated 2.6 years ago by
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written 2.6 years ago by
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1
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847
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804
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2.8 years ago
shepherl
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9
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updated 2.9 years ago by
kayla.interdonato
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written 2.9 years ago by
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722
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802
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3.0 years ago
shepherl
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876
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0
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738
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4.1 years ago
shepherl
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882
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0
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0
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812
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962
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1.1k
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1
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1
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2.0k
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updated 8.5 years ago by
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written 8.5 years ago by
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1.2k
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updated 8.9 years ago by
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written 8.9 years ago by
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Comment: Get genomic coordinates of CpGs sites (chromosomes, genomic position)
by
Yveto
•
0
Thank for your response. It is Illumina 450 K. I use this code
```{r }
library(IlluminaHumanMethylation450kanno.ilmn12.hg19)
annotat…
Answer: More regions in union when increasing DBA$config$mergeOverlap
by
Rory Stark
★
5.2k
I think the documentation is out of sync with the code. Positive values represent gaps between intervals and negative values represent how …
Comment: log2FoldChange value is way too different when compared with counts(dds)
by
Michael Love
41k
But just to be clear, this is not the same as regressing out batch from the VST (approx log transformed):
```
limma::removeBatchEffect(cou…
Comment: log2FoldChange value is way too different when compared with counts(dds)
by
HAK
•
0
Thank you for the explanation, probably my brain just needed to accumulate enough info to understand what you are saying, but I finally got…
Answer: Getting Error in hclust(d, method = method): NA/NaN/Inf in foreign function call
by
ATpoint
★
4.1k
Here the error probably means that you habe genes where expression scross all samples is the same. Rowscaling is value minus mean divided b…
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