Bioconductor DNAMethylation

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DNAMethylation ChAMP

updated 12 weeks ago by sup0903 • 0 • written 3.4 years ago by Hongbii • 0

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1.4k

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DNAMethylation QSEA MEDIP

2.9 years ago rtrivedi1 ▴ 10

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1.1k

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DNAMethylation methylationArrayAnalysis DMRcate MethylationArrayData MethylationArray

updated 12 months ago by Tim Peters ▴ 180 • written 12 months ago by Grace • 0

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980

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DNAMethylation missMethyl

updated 14 months ago by belinda.phipson ▴ 40 • written 14 months ago by Joana • 0

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550

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DNAMethylation wateRmelon Computation minfi

21 months ago calen.p.ryan • 0

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514

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DNAMethylation missMethyl Pathways

12 months ago Grace • 0

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501

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DNAMethylation MethylationArray methylationArrayAnalysis illumina

3 months ago mikat • 0

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472

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DNAMethylation EPICv2 IlluminaHumanMethylationEPICmanifest

updated 12 weeks ago by James W. MacDonald 65k • written 12 weeks ago by rae.alshammari ▴ 10

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435

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DNAMethylation limmaGUI biostatistics limma

updated 3 months ago by Gordon Smyth 50k • written 3 months ago by Jitendra ▴ 10

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361

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DNAMethylation AnnotationHub EPICv2manifest annotation

updated 5 weeks ago by Tim Peters ▴ 180 • written 6 weeks ago by s.malik • 0

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352

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DNAMethylation limma methylationArrayAnalysis

29 days ago • updated 23 days ago hortense96 • 0

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280

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DNAMethylation GO MethylationArray missMethyl EPICv2

updated 10 weeks ago by belinda.phipson ▴ 40 • written 10 weeks ago by s.malik • 0

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189

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DNAMethylation cfMeDIP-seq cfDNA qsea

updated 8 weeks ago by Simon Pearce • 0 • written 3 months ago by User3088 • 0

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104

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DNAMethylation DMRcate

6 weeks ago Macsue • 0

14 results • Page 1 of 1

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Comment: Ensembl plants at annotationHub? by Daniele • 0

Dear Johannes, Would it be possible to create the EnsDb for Triticum aestivum (IWGSC)? Thank you very much, Daniele

Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools by BioinfGuru ▴ 30

Figured it out with ?eigencorplot, thanks Michael. I was trying to pass 10 PCs when I only had 8, and I was including metadata columns that…

Answer: DECIPHER::idTaxa - broken link to download GTDB r220 (modified) trainig set by makala • 0

Thanks a lot!

Comment: DECIPHER::idTaxa - broken link to download GTDB r220 (modified) trainig set by Erik Wright ▴ 150

Thanks for notifying us of this broken link. It should be fixed on the Downloads page now. [1] [1]: http://www2.decipher.codes/Classificat…

Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa by Matthew Thornton ▴ 360

So it turns out that if the count and the size are the same in 'GOstats", the odds ratio is 'inf'. These are causing the issue. Thank you!!

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Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools

Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa

Rsubread counting peaks ATACseq

Comment: Can DESeq2 rlog normalized matrix reflects time course result directly?

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