Showing : DNAMethylation • reset
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normalizatino of dna methylation EPIC data
DNA minfiData minfiDataEPIC DNAMethylation minfi
7 weeks ago user_bioinfo • 0
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Batch Correction while implementing QSEA package
qsea MEDIPS MEDIPSData DNAMethylation
9 weeks ago User3088 • 0
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Job: Postdoctoral Research Associate in Computational Epigenomics
Phd SingleCell DNAMethylation Shanghai JobPosting
7 months ago xiaolong • 0
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Methylation Analysis experiment design using Limma
DNAMethylation limma methylationArrayAnalysis
11 months ago hortense96 • 0
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DMRcate error need at least two non-NA values to interpolate
DNAMethylation DMRcate
12 months ago Macsue • 0
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6
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unable to access Annotationhub latest record
DNAMethylation AnnotationHub EPICv2manifest annotation
updated 12 months ago by ▴ 230 • written 12 months ago by • 0
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Error in GOmeth function of missMethyl when EPICv2 annotation is used
DNAMethylation GO MethylationArray missMethyl EPICv2
13 months ago • updated 6 months ago s.malik • 0
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Seeking Strategies for Managing Duplicate CpG Entries in EPIC v2 Manifest
DNAMethylation EPICv2 IlluminaHumanMethylationEPICmanifest
updated 13 months ago by 68k • written 13 months ago by ▴ 20
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limma design model for categorical variable
DNAMethylation limmaGUI biostatistics limma
updated 14 months ago by 52k • written 14 months ago by ▴ 10
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Sample-specific methylation values using QSEA
DNAMethylation cfMeDIP-seq cfDNA qsea
14 months ago • updated 9 weeks ago User3088 • 0
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1.3k
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EPIC or EPICv2 demo data of brain samples. FlowSorted.DLPFC.EPIC Availability?
DNAMethylation MethylationArray methylationArrayAnalysis illumina
14 months ago mikat • 0
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topGO() analysis of DMPs in missMethyl methylation analysis
DNAMethylation missMethyl Pathways
23 months ago Grace • 0
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6
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1.6k
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cpg.annotate() in DMRcate error
DNAMethylation methylationArrayAnalysis DMRcate MethylationArrayData MethylationArray
updated 23 months ago by ▴ 230 • written 23 months ago by • 0
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No enriched GO terms CpGs
DNAMethylation missMethyl
updated 2.1 years ago by ▴ 40 • written 2.1 years ago by • 0
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A survey of computational setups for Illumina Infinium DNA methylation EPIC array pipeline
DNAMethylation wateRmelon Computation minfi
2.7 years ago calen.p.ryan • 0
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Annotation using QSEA package
DNAMethylation QSEA MEDIP
3.8 years ago rtrivedi1 ▴ 10
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5
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Why the LogFC and delta-beta value are different in ChAMP
DNAMethylation ChAMP
updated 13 months ago by • 0 • written 4.3 years ago by • 0
17 results • Page 1 of 1
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Comment: BiocParallel_1.40.1.tar.gz not available by Johan • 0
It worked. Thanks :)
Comment: Model performance for spline modelling of RNA-seq timecourses in edgeR by skiaphrene ▴ 10
Dear Gordon, Thank you very much for your prompt reply. I agree with the limma/edgeR perspective of including all potentially explanatory…
Comment: how to use `arrayWeightsQuick()`? by Gordon Smyth 52k
What sort of object is `expression`? Does it contain any missing values?
Answer: Deleted:No significant MVPs with a BH adjusted P-value below 0.05 by shocked.tick.zyet • 0
Dealing with those adjusted p-values in ChAMP can feel like a frustrating game of [Uno Online](https://unoonlinefree.com) , especially when…
Comment: DESeq2 lfcShrink drastic shrinkage by Nick • 0
Did you ever figure out the cause of this? I am seeing very similar results and wondering if you have advice on how you may have resolved t…
Votes
Answer: BiocParallel_1.40.1.tar.gz not available
Modelling gene program dynamics across time with {lemur}
A: DESeq2 one group vs multiple groups comparison in presence of batch effect
Comment: BiocParallel_1.40.1.tar.gz not available
Comment: BiocParallel_1.40.1.tar.gz not available
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