Showing : Bioconductor • reset
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Error while installing BiocManager::install("org.Vdahliae.eg.db")
org.vdahlaie.eg.db Bioconductor
updated 1 day ago by 690 • written 1 day ago by ▴ 10
0
votes
1
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99
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Recovering my account credentials on Bioconductor
Bioconductor
updated 9 days ago by 3.9k • written 9 days ago by • 0
4
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0
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131
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News: Bioconductor 3.19 is Released!
Release Bioconductor Packages Software
15 days ago shepherl 3.9k
0
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0
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92
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News: BioC2024 deadlines approaching
BioC2024 Bioconductor Community
16 days ago Maria Doyle ▴ 70
1
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0
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340
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Tutorial: Installing/switching between versions of R/Rstudio/Bioconductor on personal machine (Linux | Ubuntu)
bioconductor Install
27 days ago BioinfGuru ▴ 30
0
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0
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98
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News: Important Release 3.18 Freeze Announcment
Release release Bioconductor Bioconducto
4 weeks ago shepherl 3.9k
0
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7
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434
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Internet connection for Bioconductor packages in Rstudio in Iran...
No_internet_connection_Packages Proxy Bioconductor GEOquery Internet_connection_problem
6 weeks ago needNGS • 0
0
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2
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188
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bioconductor emailing list
Bioconductor
updated 7 weeks ago by 3.9k • written 7 weeks ago by • 0
0
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0
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162
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News: Deadline Extended - BioC2024 Abstracts and Sticker Contest - April 1st!
BioC2024 Conference Bioconductor
7 weeks ago Maria Doyle ▴ 70
1
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0
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314
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News: Last Call: Nominations for Bioconductor Awards 2024! Deadline May 15
Recognition Awards Bioconductor Bioc204
7 weeks ago • updated 2 days ago shepherl 3.9k
1
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275
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supportedOrganisms() in goseq producing Error in names(trackIds)
goseq Bioconductor rtracklayer
10 weeks ago thomas • 0
0
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0
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195
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News: BioC2024 registration is now open!
BioC2024 Conference Bioconductor Community
10 weeks ago Maria Doyle ▴ 70
1
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0
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289
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News: Nominations for Bioconductor Awards 2024!
Recognition Awards Bioconductor Bioc2024
12 weeks ago • updated 10 weeks ago shepherl 3.9k
0
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1
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326
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News: BioC2024 abstract submission is open!
BioC2024 Conference Bioconductor
updated 8 weeks ago by • 0 • written 12 weeks ago by ▴ 70
0
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0
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189
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News: EuroBioC2024 abstract submission is open!
Conference Bioconductor EuroBioC2024
3 months ago Maria Doyle ▴ 70
2
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253
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News: Upholding our core values: a reminder of the Bioconductor Code of Conduct
Bioconductor
3 months ago Maria Doyle ▴ 70
0
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1
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259
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Bioconductor: Won't Update to 3.18 with Default Command
Bioconductor
updated 3 months ago by ▴ 730 • written 3 months ago by ▴ 30
1
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5
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513
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Can't post a question containing code?
Bioconductor
updated 6 days ago by • 0 • written 3 months ago by ▴ 10
0
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1
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213
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Limitation on single file size and package size when developing Bioc package
packagedevelopment datalimit Bioconductor
updated 3 months ago by 16k • written 3 months ago by • 0
6
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11
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1.1k
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Packages don't update, but no error or warning is thrown
Bioconductor
3 months ago gernophil • 0
0
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0
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265
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News: Note about packages submitted for Bioconductor 3.19
Release Submission release Bioconductor
3 months ago shepherl 3.9k
2
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1
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292
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News: "Edit" button not working
Bioconductor Website SupportSite
updated 3 months ago by • 0 • written 3 months ago by 3.9k
2
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2
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330
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How to contact Bioconductor's test host?
Bioconductor
updated 4 months ago by 16k • written 4 months ago by ▴ 30
4
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3
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353
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Bioconductor code browser time out
Bioconductor
updated 4 months ago by ★ 6.5k • written 4 months ago by ▴ 30
0
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4
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796
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Bioconductor installation
Bioconductor
written 4 months ago by • 0
3
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1
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335
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News: Bioconductor.org has a new look!
Bioconductor Website
written 4 months ago by 3.9k
0
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0
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287
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News: Online course - FLOW CYTOMETRY DATA ANALYSIS WITH R/BIOCONDUCTOR
Bioconductor FlowCytometryData FlowCytometry
4 months ago info ▴ 10
0
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0
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258
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Normalising processed Proteomics data in R
Bioconductor Proteomics
5 months ago Joshua • 0
2
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0
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498
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News: Bioconductor's Transition Away from Twitter/X
Bioconductor
6 months ago Maria Doyle ▴ 70
0
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0
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308
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News: CRAN downtime
BiocManager Bioconductor
6 months ago shepherl 3.9k
2
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4
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657
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Import a Bioconductor package that is only used in a vignette/.Rmd script
Bioconductor PackageType BiocStyle
updated 6 months ago by 3.9k • written 6 months ago by • 0
0
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3
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581
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Support for installation and usage of TxDb.Hsapiens.UCSC.hg19.knownGene package in R version 4.2.2
Bioconductor BiocPkgTools
6 months ago blessybo • 0
0
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1
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356
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Advice needed on package using online databases (fails CHECK when database is down)
Bioconductor
updated 6 months ago by 3.9k • written 6 months ago by ▴ 30
5
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1
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461
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News: Bioconductor 3.18 is Released!
Packages Bioconductor Release Software
written 6 months ago by 3.9k
0
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0
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376
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News: COURSE - Developing R/Bioconductor Packages for Genomics
Bioconductor PackageTypeData PackageType
6 months ago info ▴ 10
2
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1
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874
views
limma::topTable with adjust.method=NULL is not BH corrected (manual is inconsistent with behavior?)
Bioconductor biocon limma
updated 7 months ago by 50k • written 7 months ago by • 0
2
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11
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963
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Error MakeOrgPackagefromNCBI
Bioconductor
updated 3 months ago by ★ 4.0k • written 7 months ago by • 0
5
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2
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787
views
ComBat_seq function in sva package does not return a matrix
sva ComBat ComBat-seq Bioconductor ComBat_seq
7 months ago Federico ▴ 10
0
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2
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676
views
For R version 4.0.2 and Biconductor version 3.11, clusterProfiler is not working
Bioconductor clusterProfiler
updated 7 months ago by 65k • written 7 months ago by • 0
0
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2
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1.1k
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Bioconductor version cannot be validated
Bioconductor
updated 6 months ago by • 0 • written 7 months ago by • 0
0
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1
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3.7k
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Bioconductor version cannot be validated
Bioconductor Annotation Ann
updated 8 months ago by 65k • written 8 months ago by • 0
0
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2
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970
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MACS2 not installing
Bioconductor
8 months ago alia.sinqua • 0
0
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0
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647
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NAs in tabular output from DNAcopy
Bioconductor DNAcopy
8 months ago NewtoBioconductor • 0
0
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2
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815
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Job: Bioinformatics Laboratory Head in AI or machine learning (WEHI, Australia)
bioconductor artificialintelligence JobPosting machinelearning
written 8 months ago by 50k
0
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1
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424
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Package "Netboost" is an Unix-only package, how can I install it in R?
Bioconductor netboost
updated 8 months ago by ★ 4.1k • written 9 months ago by • 0
1
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4
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788
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running Bioconductor Docker images only works with versions <= 3.15
Bioconductor
9 months ago • updated 8 months ago patrick.turko • 0
1
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2
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683
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unable to retrieve certain packages from bioconductor 3.15
Bioconductor biocondu
updated 9 months ago by 65k • written 9 months ago by ▴ 10
0
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0
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481
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News: Bioconductor.org website new design - We Need Your Input!
Bioconductor Community Website
9 months ago Maria Doyle ▴ 70
0
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2
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2.5k
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vmatchPattern on DNAstring set
Bioconductor
9 months ago Avner • 0
0
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1
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494
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Read methylation data from tar files on GEO (GSE73303)
GeneExpression Bioconductor GEOquery MethylationArrayData
9 months ago Arianna • 0
50 results • Page 1 of 1
Recent ...
Replies
Comment: Ensembl plants at annotationHub? by Daniele • 0
Dear Johannes, Would it be possible to create the EnsDb for Triticum aestivum (IWGSC)? Thank you very much, Daniele
Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools by BioinfGuru ▴ 30
Figured it out with ?eigencorplot, thanks Michael. I was trying to pass 10 PCs when I only had 8, and I was including metadata columns that…
Answer: DECIPHER::idTaxa - broken link to download GTDB r220 (modified) trainig set by makala • 0
Thanks a lot!
Comment: DECIPHER::idTaxa - broken link to download GTDB r220 (modified) trainig set by Erik Wright ▴ 150
Thanks for notifying us of this broken link. It should be fixed on the Downloads page now. [1] [1]: http://www2.decipher.codes/Classificat…
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa by Matthew Thornton ▴ 360
So it turns out that if the count and the size are the same in 'GOstats", the odds ratio is 'inf'. These are causing the issue. Thank you!!
Votes
Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
Rsubread counting peaks ATACseq
Comment: Can DESeq2 rlog normalized matrix reflects time course result directly?
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