0
votes
0
replies
946
views
News: Bioc2020 - Deadline for workshops/talk/poster TOMORROW
bioc2020 event conference bioconductor News
5.0 years ago shepherl 4.1k
2
votes
0
replies
838
views
News: [CDSB] From Bioconductor users to developers: our first community submission
CDSB News
5.0 years ago Leonardo Collado Torres ★ 1.1k
3
votes
1
reply
1.1k
views
News: [Pre-print] Transcriptome-scale spatial gene expression in the human dorsolateral prefrontal cortex
biorxiv spatialLIBD News
written 5.0 years ago by ★ 1.1k
0
votes
0
replies
1.1k
views
News: List of Deprecated Packages Bioc 3.11
annotation experimentdata software release deprecation News
5.0 years ago shepherl 4.1k
0
votes
0
replies
792
views
News: Changes to BioMart in Ensembl release 100 and Ensembl Genomes release 47
biomaRt Ensembl News
5.0 years ago Astrid_Ensembl • 0
0
votes
0
replies
834
views
News: Bioc2020 - Deadline for workshops/talk/poster proposals in ONE week
bioconductor conference event bioc2020 News
5.0 years ago shepherl 4.1k
0
votes
0
replies
817
views
News: RNAseq data analysis with R and Bioconductor
limma deseq2 go edger News
5.0 years ago info ▴ 10
0
votes
0
replies
895
views
News: Bioc2020 - Deadline for workshops/talk/poster proposals in two weeks!
bioconductor bioc2020 event conference News
5.0 years ago shepherl 4.1k
0
votes
0
replies
955
views
News: Bioc2020 - Registration - Call for abstracts for workshops/talks/poster - travel and caregiver scholarships
conference bioconductor event bioc2020 News
5.1 years ago shepherl 4.1k
1
vote
0
replies
1.2k
views
News: News: Bioinformatics Summer School - July 2020 - UCLouvain (Belgium)
rnaseq course proteomics transcriptomics scrnaseq News
5.1 years ago Laurent Gatto 1.6k
7
votes
1
reply
1.7k
views
News: Bioconductor Community Advisory Board Nominees
news community bioconductor oversight News
updated 5.1 years ago by 21k • written 5.1 years ago by ▴ 1000
2
votes
1
reply
917
views
News: Results: Bioconductor Community Survey
community feedback News
5.1 years ago Matthew Ritchie ▴ 1000
1
vote
0
replies
912
views
News: Bioc2020 - Registration Open - Call for abstracts workshops/talks/posters Open
bioconductor conference event News
5.1 years ago shepherl 4.1k
0
votes
0
replies
972
views
News: Ensembl 99 has been released and renaming of species
biomart ensembl e99 mart news News
5.1 years ago Thomas Maurel ▴ 800
0
votes
0
replies
603
views
News: Updates to this Bioconductor Support Site
support site downtime News
5.1 years ago shepherl 4.1k
0
votes
0
replies
1.1k
views
News: EMBO | EMBL Symposium: The Molecular Basis and Evolution of Sexual Dimorphism
events biology sexual dimorphism conference News
5.1 years ago EMBL Events • 0
0
votes
1
reply
1.1k
views
News: List of Deprecated Packages Bioc 3.11
annotation experimentdata software release deprecation News
5.2 years ago shepherl 4.1k
0
votes
0
replies
1.5k
views
News: May Institute Computation and statistics for mass spectrometry and proteomics
conference mass spectrometry proteomics News
5.2 years ago shepherl 4.1k
1
vote
0
replies
963
views
News: New BSgenome data packages for bosTau9, rheMac10, danRer11, and galGal6
BSgenome News
5.2 years ago Hervé Pagès 16k
3
votes
0
replies
1.0k
views
News: BioC2020: mark your calendars!
conference News
5.3 years ago Levi Waldron ★ 1.1k
3
votes
0
replies
1.5k
views
News: EnsDb databases for Ensembl release 98 provide now also transcripts' GC content
annotation ensembldb EnsDb AnnotationHub News
5.3 years ago Johannes Rainer ★ 2.1k
0
votes
0
replies
1.1k
views
News: course - Protemics with R and Bioconductor - 17-19 February 2020 in Berlin
Bioconductor R Proteomics News
5.3 years ago info ▴ 10
0
votes
0
replies
788
views
News: Single Package Builder for New Package Submissions
new package submission release News
5.3 years ago shepherl 4.1k
0
votes
0
replies
1.1k
views
News: List of Deprecated Packages Bioc 3.11
annotation experimentdata software release deprecation News
5.3 years ago shepherl 4.1k
0
votes
2
replies
2.1k
views
News: Final List of Deprecated Packages for Bioc3.10
annotation experimentdata deprecation release software News
5.4 years ago • updated 5.3 years ago shepherl 4.1k
2
votes
2
replies
1.3k
views
News: Bioconductor Devel 3.11 Notification
software bioconductor packages reports News
5.3 years ago shepherl 4.1k
6
votes
0
replies
1.1k
views
News: Bioconductor 3.10 is released!!
release software packages bioconductor News
5.3 years ago shepherl 4.1k
1
vote
3
replies
1.6k
views
News: European Bioconductor meeting 2019, 9 - 10 December in Brussels, Belgium
conference EuroBioc News
5.4 years ago • updated 5.3 years ago Laurent Gatto 1.6k
0
votes
0
replies
1.1k
views
News: Important Deadlines for RELEASE
release devel deadline News
updated 5.4 years ago by 25k • written 5.4 years ago by 4.1k
0
votes
0
replies
903
views
News: Bioconductor 3.10 db0s are available
news release annotation db0 deadline News
5.4 years ago kayla.interdonato ▴ 160
0
votes
0
replies
931
views
News: Deadline for commits to current Release 3.9 Branch
release deadline News
5.4 years ago shepherl 4.1k
3
votes
0
replies
1.2k
views
News: Bioconductor Community Survey
feedback community News
5.4 years ago Matthew Ritchie ▴ 1000
1
vote
0
replies
909
views
News: Package Submission Deadline is TODAY!!
release new submission package submission deadline News
5.4 years ago shepherl 4.1k
2
votes
0
replies
965
views
News: Certificate ERROR resolved
website bioconductor News
5.4 years ago shepherl 4.1k
0
votes
0
replies
1.1k
views
News: List of Deprecated Packages Bioc 3.10
annotation experimentdata software release deprecation News
5.5 years ago • updated 5.4 years ago shepherl 4.1k
0
votes
0
replies
1.1k
views
News: Deadline for commits to current Release 3.9 Branch and Devel 3.10
release freeze deadline devel News
5.4 years ago shepherl 4.1k
0
votes
0
replies
1.2k
views
News: Ensembl 98 has been released and renaming of species
biomart ensembl e98 mart News
5.4 years ago Thomas Maurel ▴ 800
0
votes
0
replies
871
views
News: Bay area Biotech-Pharma Statistics Workshop, with free R user meetup (Nov 6-8)
cancer meetup News
5.5 years ago Ning Leng • 0
2
votes
0
replies
1.4k
views
News: Organizing Committee for BioC2020
conference committee Bioc2020 News
5.5 years ago shepherl 4.1k
0
votes
0
replies
855
views
News: Protemics with R and Bioconductor course in Berlin
R Proteomics News
5.5 years ago info ▴ 10
5
votes
0
replies
985
views
News: Cite Bioconductor packages using Zotero (browser extension)
Zotero News
5.5 years ago Qiang ▴ 80
0
votes
0
replies
985
views
News: New Package Submission Deadline for Bioc Release 3.10
release package submission deadline new package News
5.5 years ago shepherl 4.1k
0
votes
0
replies
804
views
News: Bioconductor 3.10 release schedule
bioconductor release deadlines News
5.5 years ago shepherl 4.1k
1
vote
0
replies
595
views
News: Problems with email notifications
support service-outage News
5.5 years ago Martin Morgan 25k
3
votes
0
replies
1.0k
views
News: Registrations are now open for BioC Asia 2019
BioC Asia Events Conferences Bioinfosummer News
5.5 years ago Steve Pederson ▴ 170
11
votes
1
reply
1.4k
views
News: Rsubread now available for Windows
rsubread News
5.5 years ago Gordon Smyth 52k
0
votes
0
replies
1.1k
views
News: R/Bioconductor for Mass Spectrometry and Proteomics course in Berlin
Bioconductor R News
5.5 years ago info ▴ 10
0
votes
1
reply
1.3k
views
News: List of Deprecated Packages Bioc 3.10
annotation experimentdata software deprecation release News
5.6 years ago • updated 5.5 years ago shepherl 4.1k
0
votes
0
replies
846
views
News: Course in Berlin- Genomics with R and Bioconductor - September 16-20
deseq2 edger limma News
5.6 years ago info ▴ 10
2
votes
1
reply
1.0k
views
News: Bioconductor Technical Advisory Board Nominees
bioconductor oversight News
5.6 years ago Martin Morgan 25k
533 results • Page 6 of 11
Recent ...
Replies
Comment: how many significant figures are there in DESeq2 output by ATpoint ★ 4.7k
If you want consistency then use a fixed software environment like Docker, wirh fixed code and thresholds that make sense. Rounding to near…
Comment: Compare TCGA-PAAD with GTEx gene expression by Jane • 0
why aren't there any answers?
Comment: Too many significant genes when integrating gtex and tcga by Jane • 0
I encountered the same issue: too many DEGs after limma analysis. It is sad that until today we can still see the paper published where GTE…
Comment: how many significant figures are there in DESeq2 output by Matthew McCormack ▴ 180
Thank you for your reply. It is good to know that cutoff of 0.05 means less than 0.05. My concerns are about consistency and reproducibili…
Comment: DiffBind edgeR normalization --- why are the normalization factors all equal to by ATpoint ★ 4.7k
No, normalization factors from edgeR rather than size factors from DESeq2 are not proportional, it's a different concept and implementation…
Votes
A: Unbalanced experiment with multiple samples from each patient.
Unbalanced experiment with multiple samples from each patient.
Answer: Vertical line at A=0, nothing else, on MA plot
Answer: GSVA Error Code "Calling gsva(expr=., gset.idx.list=., method=., ...) is defunct
Answer: Group-specific condition effects with individuals nested: matrix is not full ra
Awards • All
Popular Question to svlachavas ▴ 840
Popular Question to Matthew McCormack ▴ 180
Popular Question to James W. MacDonald 68k
Popular Question to shepherl 4.1k
Popular Question to Marco • 0
Locations • All
United States, 21 minutes ago
UPF, Barcelona, Spain, 1 hour ago
India, 1 hour ago
United States, 1 hour ago
Czechia, 1 hour ago
Traffic: 1626 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6