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Comment: Comment: replaceOutliers in DESeq2 : need to recompute size Factors ?
3.8 years ago eleonoregravier ▴ 70
0
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991
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Comment: Comment: replaceOutliers in DESeq2 : need to recompute size Factors ?
3.8 years ago eleonoregravier ▴ 70
0
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4
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991
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replaceOutliers in DESeq2 : need to recompute size Factors ?
DESeq2
3.8 years ago eleonoregravier ▴ 70
0
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1
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5.0k
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Comment: C: Deseq2: How to adjust for baseline read counts when testing for groups differenc
5.0 years ago eleonoregravier ▴ 70
4
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5
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2.5k
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sample size determination in microarrays studies with limma analysis
limma sample size microarrays statistical power
6.7 years ago eleonoregravier ▴ 70
0
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2
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2.5k
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Answer: A: sample size determination in microarrays studies with limma analysis
6.7 years ago eleonoregravier ▴ 70
0
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1
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1.4k
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Comment: C: Different microarrays annotations provided by toTable and annotateEset functions
6.9 years ago eleonoregravier ▴ 70
1
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3
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1.4k
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Different microarrays annotations provided by toTable and annotateEset functions
microarray annotation annotationdbi affycoretools annotationtools
updated 6.9 years ago by 67k • written 6.9 years ago by ▴ 70
0
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1
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3.3k
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Comment: C: Batch with only one sample or condition
updated 9.0 years ago by 52k • written 9.0 years ago by ▴ 70
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1
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3.3k
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Comment: C: Batch with only one sample or condition
9.0 years ago eleonoregravier ▴ 70
0
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0
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3.3k
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Comment: C: Batch with only one sample or condition
9.0 years ago eleonoregravier ▴ 70
8
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14
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3.3k
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Batch with only one sample or condition
limma batch effect
updated 9.0 years ago by 52k • written 9.0 years ago by ▴ 70
0
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1
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3.3k
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Comment: C: Batch with only one sample or condition
updated 9.0 years ago by ★ 7.9k • written 9.0 years ago by ▴ 70
0
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0
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3.4k
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Comment: C: limma with continous covariate depending on gene, 2 block variables, pairing and
9.1 years ago eleonoregravier ▴ 70
0
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1
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3.4k
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Comment: C: limma with continous covariate depending on gene, 2 block variables, pairing and
9.1 years ago eleonoregravier ▴ 70
0
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1
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3.4k
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Comment: C: limma with continous covariate depending on gene, 2 block variables, pairing and
9.1 years ago eleonoregravier ▴ 70
0
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1
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3.4k
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Comment: C: limma with continous covariate depending on gene, 2 block variables, pairing and
9.1 years ago eleonoregravier ▴ 70
0
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1
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3.4k
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Comment: C: limma with continous covariate depending on gene, 2 block variables, pairing and
9.1 years ago eleonoregravier ▴ 70
0
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1
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3.4k
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Comment: C: limma with continous covariate depending on gene, 2 block variables, pairing and
9.1 years ago eleonoregravier ▴ 70
0
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1
reply
3.4k
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Comment: C: limma with continous covariate depending on gene, 2 block variables, pairing and
9.1 years ago eleonoregravier ▴ 70
6
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14
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3.4k
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limma with continous covariate depending on gene, 2 block variables, pairing and technical replicates
limma covariate block paired samples technical replicates
updated 9.1 years ago by ★ 28k • written 9.1 years ago by ▴ 70
2
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1
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1.7k
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Main effects in multi-level experiment in limma
limma multifactorial design
updated 9.2 years ago by ★ 7.9k • written 9.2 years ago by ▴ 70
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0
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9.2k
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Comment: C: batch effect : comBat or blocking in limma ?
9.2 years ago eleonoregravier ▴ 70
0
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0
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9.2k
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Comment: C: batch effect : comBat or blocking in limma ?
9.2 years ago eleonoregravier ▴ 70
7
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7
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9.2k
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batch effect : comBat or blocking in limma ?
batch effect combat limma block
updated 9.2 years ago by ★ 7.9k • written 9.2 years ago by ▴ 70
0
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0
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3.3k
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Comment: C: Statistical analysis of Spectral count data : edgeR, limma or others ?
9.4 years ago eleonoregravier ▴ 70
8
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2
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3.3k
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Statistical analysis of Spectral count data : edgeR, limma or others ?
spectral counts proteomics limma edger deseq
updated 9.4 years ago by 52k • written 9.4 years ago by ▴ 70
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1
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3.8k
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Comment: C: edgeR for metagenomic data
9.4 years ago eleonoregravier ▴ 70
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0
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3.8k
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Comment: C: edgeR for metagenomic data
9.5 years ago eleonoregravier ▴ 70
2
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8
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3.8k
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edgeR for metagenomic data
edger metagenomics
updated 9.5 years ago by ▴ 280 • written 9.5 years ago by ▴ 70
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1
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3.8k
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Answer: A: edgeR for metagenomic data
9.5 years ago eleonoregravier ▴ 70
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