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0
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2
replies
921
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annotate peaks using a custom genome
ChIPSeq annotate ChIPpeakAnno
updated 20 months ago by ▴ 70 • written 20 months ago by ▴ 140
0
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0
replies
921
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Comment: Comment: annotate peaks using a custom genome
20 months ago C T ▴ 140
0
votes
2
replies
905
views
DiffBind custom normalization factor
diffbind
updated 4.2 years ago by ★ 5.2k • written 4.8 years ago by ▴ 140
4
votes
5
replies
2.3k
views
emptyDrops identified less non-empty cells with lower total UMI counts?
DropletUtils scRNA-seq emptyDrops simplesinglecell cell calling
updated 4.2 years ago by ★ 28k • written 5.4 years ago by ▴ 140
1
vote
0
replies
2.4k
views
Comment: C: counts of overlapping peaks using findOverlapOfPeaks from ChIPpeakAnno
4.3 years ago C T ▴ 140
7
votes
9
replies
2.4k
views
counts of overlapping peaks using findOverlapOfPeaks from ChIPpeakAnno
chippeakanno
updated 4.3 years ago by ★ 4.3k • written 4.4 years ago by ▴ 140
1
vote
0
replies
2.4k
views
Comment: C: counts of overlapping peaks using findOverlapOfPeaks from ChIPpeakAnno
4.3 years ago C T ▴ 140
1
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1
reply
2.4k
views
Comment: C: counts of overlapping peaks using findOverlapOfPeaks from ChIPpeakAnno
4.3 years ago C T ▴ 140
1
vote
1
reply
2.4k
views
Comment: C: counts of overlapping peaks using findOverlapOfPeaks from ChIPpeakAnno
4.4 years ago C T ▴ 140
0
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0
replies
1.0k
views
Comment: C: how to suppress makeVennDiagram plot
4.4 years ago C T ▴ 140
2
votes
2
replies
1.0k
views
how to suppress makeVennDiagram plot
ChIPpeakAnno
4.4 years ago C T ▴ 140
1
vote
3
replies
1.4k
views
csaw differential binding visualization
csaw
updated 4.8 years ago by ★ 28k • written 4.8 years ago by ▴ 140
0
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0
replies
2.5k
views
Comment: C: DiffBind for ATAC-seq -- bFullLibrarySize parameter
4.8 years ago C T ▴ 140
0
votes
1
reply
899
views
Comment: C: how to draw multiple heatmap from GeneOverlap
4.9 years ago C T ▴ 140
0
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3
replies
899
views
how to draw multiple heatmap from GeneOverlap
GeneOverlap multiple figures heatmap
updated 4.9 years ago by 67k • written 4.9 years ago by ▴ 140
0
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0
replies
2.5k
views
Comment: C: Error in creating BSGenome package
5.2 years ago C T ▴ 140
0
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1
reply
2.3k
views
Comment: C: emptyDrops identified less non-empty cells with lower total UMI counts?
5.4 years ago C T ▴ 140
1
vote
1
reply
2.4k
views
Advice on correcting for batch effect using DESeq2
deseq2
updated 5.7 years ago by 43k • written 5.7 years ago by ▴ 140
0
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0
replies
3.7k
views
Comment: C: Dispersion fit and p-value distributions
6.2 years ago C T ▴ 140
0
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0
replies
3.7k
views
Comment: C: Dispersion fit and p-value distributions
6.2 years ago C T ▴ 140
7
votes
9
replies
3.7k
views
Dispersion fit and p-value distributions
deseq2 rnaseq fdrtool
updated 6.2 years ago by ★ 7.9k • written 6.2 years ago by ▴ 140
0
votes
2
replies
3.7k
views
Comment: C: Dispersion fit and p-value distributions
6.2 years ago C T ▴ 140
0
votes
1
reply
3.3k
views
Comment: C: DESeq2 PCA plot on fitted values
6.5 years ago C T ▴ 140
0
votes
0
replies
3.3k
views
Comment: C: DESeq2 PCA plot on fitted values
6.5 years ago C T ▴ 140
6
votes
5
replies
2.9k
views
reads alignment statistics
rsubread bioconductor
updated 7.3 years ago by 16k • written 7.3 years ago by ▴ 140
1
vote
0
replies
2.9k
views
Comment: C: reads alignment statistics
7.3 years ago C T ▴ 140
0
votes
1
reply
2.9k
views
Comment: C: reads alignment statistics
7.3 years ago C T ▴ 140
0
votes
1
reply
2.1k
views
PCR bottleneck coefficient (PBC)
chipqc
updated 7.5 years ago by ★ 5.2k • written 7.5 years ago by ▴ 140
0
votes
1
reply
3.3k
views
Comment: C: Technical details of DiffBind correlation analysis
7.5 years ago C T ▴ 140
0
votes
0
replies
1.5k
views
Comment: C: ChIPQC plotCoverageHist() and plotCC() not showing inputs
7.5 years ago C T ▴ 140
0
votes
0
replies
1.2k
views
Comment: C: ChIPQC plots for input samples
7.5 years ago C T ▴ 140
0
votes
2
replies
1.2k
views
ChIPQC plots for input samples
chipqc
updated 7.5 years ago by ▴ 420 • written 7.5 years ago by ▴ 140
0
votes
3
replies
1.4k
views
ChIPQC reading more samples that it should
chipqc
7.5 years ago C T ▴ 140
0
votes
1
reply
1.4k
views
Answer: A: ChIPQC reading more samples that it should
7.5 years ago C T ▴ 140
0
votes
0
replies
2.9k
views
Comment: C: ChIPseeker annotatePeak definition
8.3 years ago C T ▴ 140
0
votes
2
replies
2.9k
views
ChIPseeker annotatePeak definition
chipseeker
updated 8.3 years ago by ★ 1.2k • written 8.3 years ago by ▴ 140
0
votes
0
replies
3.9k
views
Comment: C: nearest genes using TxDb.Hsapiens.UCSC.hg19
8.6 years ago C T ▴ 140
0
votes
1
reply
3.9k
views
Comment: C: nearest genes using TxDb.Hsapiens.UCSC.hg19
8.6 years ago C T ▴ 140
0
votes
0
replies
3.9k
views
Comment: C: nearest genes using TxDb.Hsapiens.UCSC.hg19
8.6 years ago C T ▴ 140
0
votes
0
replies
3.9k
views
Comment: C: nearest genes using TxDb.Hsapiens.UCSC.hg19
8.6 years ago C T ▴ 140
5
votes
15
replies
3.9k
views
nearest genes using TxDb.Hsapiens.UCSC.hg19
txdb.hsapiens.ucsc.hg19.knowngene ChIPpeakAnno
updated 8.6 years ago by ★ 4.3k • written 8.6 years ago by ▴ 140
0
votes
1
reply
3.9k
views
Comment: C: nearest genes using TxDb.Hsapiens.UCSC.hg19
8.6 years ago C T ▴ 140
0
votes
0
replies
3.9k
views
Comment: C: nearest genes using TxDb.Hsapiens.UCSC.hg19
8.6 years ago C T ▴ 140
0
votes
1
reply
3.9k
views
Comment: C: nearest genes using TxDb.Hsapiens.UCSC.hg19
8.6 years ago C T ▴ 140
0
votes
2
replies
3.9k
views
Answer: A: nearest genes using TxDb.Hsapiens.UCSC.hg19
8.6 years ago C T ▴ 140
0
votes
0
replies
1.5k
views
get precursor mirna from mature mirna
bioconductor mirna mir mirbase.db
9.0 years ago C T ▴ 140
0
votes
0
replies
2.7k
views
Comment: C: mzR crashes R
11.8 years ago C T ▴ 140
0
votes
1
reply
2.7k
views
Comment: C: mzR crashes R
11.8 years ago C T ▴ 140
0
votes
1
reply
2.7k
views
Comment: C: mzR crashes R
11.8 years ago C T ▴ 140
0
votes
0
replies
1.8k
views
Comment: C: installing Rdisop
11.8 years ago C T ▴ 140
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