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catchSalmon
catchSalmon edgeR
updated 22 months ago by 52k • written 3.5 years ago by ▴ 620
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Comment: C: isoform data, deep sequencing and voom
4.5 years ago Ina Hoeschele ▴ 620
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Comment: C: isoform data, deep sequencing and voom
4.5 years ago Ina Hoeschele ▴ 620
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1.6k
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Comment: C: isoform data, deep sequencing and voom
4.5 years ago Ina Hoeschele ▴ 620
0
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1.6k
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Comment: C: isoform data, deep sequencing and voom
4.5 years ago Ina Hoeschele ▴ 620
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5
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1.6k
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isoform data, deep sequencing and voom
isoform deep sequencing voom
updated 4.5 years ago by 52k • written 4.5 years ago by ▴ 620
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Comment: C: mean-variance trend plots with isoform and gene-level data from tximport
4.5 years ago Ina Hoeschele ▴ 620
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mean-variance trend plots with isoform and gene-level data from tximport
tximport isoform voom
updated 4.6 years ago by 52k • written 4.6 years ago by ▴ 620
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2.6k
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tximport counts versus TPM
tximport TPM
updated 4.6 years ago by 43k • written 4.6 years ago by ▴ 620
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Comment: C: tximport importer isoform abundance
4.6 years ago Ina Hoeschele ▴ 620
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4
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1.6k
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tximport importer isoform abundance
tximport
updated 20 months ago by ▴ 200 • written 4.6 years ago by ▴ 620
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1.7k
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Comment: C: TPM and FPKM for lncRNA
6.7 years ago Ina Hoeschele ▴ 620
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1
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1.7k
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TPM and FPKM for lncRNA
GenomicFeatures TPM FPKM lncRNA
6.7 years ago Ina Hoeschele ▴ 620
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7.0k
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Comment: C: strange results with featureCounts
6.7 years ago Ina Hoeschele ▴ 620
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Rsubread align for miRNAseq?
rsubread miRNA
updated 8.3 years ago by ★ 3.6k • written 8.3 years ago by ▴ 620
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2.0k
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Comment: C: Rsubread align for miRNAseq?
8.3 years ago Ina Hoeschele ▴ 620
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1
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2.4k
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Comment: C: tagwise parameters for negative binomial distribution in edgeR
10.9 years ago Ina Hoeschele ▴ 620
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2.4k
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Comment: C: voom
11.6 years ago Ina Hoeschele ▴ 620
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Comment: C: voom
11.6 years ago Ina Hoeschele ▴ 620
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5
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2.4k
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voom
RNASeq RNASeq
11.6 years ago Ina Hoeschele ▴ 620
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Answer: A: voom
11.6 years ago Ina Hoeschele ▴ 620
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3
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SNP annotation in R
SNP SNP
11.6 years ago Ina Hoeschele ▴ 620
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Answer: A: SNP annotation in R
11.6 years ago Ina Hoeschele ▴ 620
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Answer: A: problem installing limma
11.7 years ago Ina Hoeschele ▴ 620
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1
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1.3k
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problem installing limma
limma limma
11.7 years ago Ina Hoeschele ▴ 620
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1
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1.3k
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RCurl problem
biomaRt biomaRt
updated 12.8 years ago by 67k • written 12.8 years ago by ▴ 620
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Comment: C: problem with GO terms
13.2 years ago Ina Hoeschele ▴ 620
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1
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2.0k
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Comment: C: problem with GO terms
13.2 years ago Ina Hoeschele ▴ 620
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1
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1.1k
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installation of bioconductopr packages fails
updated 13.2 years ago by ★ 6.5k • written 13.2 years ago by ▴ 620
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Comment: C: problem with GO terms
13.2 years ago Ina Hoeschele ▴ 620
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1
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2.0k
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Comment: C: problem with GO terms
13.2 years ago Ina Hoeschele ▴ 620
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2.0k
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Comment: C: problem with GO terms
13.2 years ago Ina Hoeschele ▴ 620
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9
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2.0k
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problem with GO terms
GO GOstats Category GO GOstats Category
updated 13.2 years ago by 67k • written 13.2 years ago by ▴ 620
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Answer: A: memory problem
13.6 years ago Ina Hoeschele ▴ 620
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1.6k
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Comment: C: lumi, Illumina Methylation 450k, and robust methylation calls
13.6 years ago Ina Hoeschele ▴ 620
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1.6k
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Comment: C: lumi, Illumina Methylation 450k, and robust methylation calls
13.6 years ago Ina Hoeschele ▴ 620
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1.2k
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Answer: A: lumi, Illumina Methylation 450k, and robust methylation calls
13.7 years ago Ina Hoeschele ▴ 620
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1.9k
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Comment: C: Lumi methylation analysis errors in lmFit
13.7 years ago Ina Hoeschele ▴ 620
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Comment: C: Filtering out tags with low counts in DESeq and EgdeR?
13.7 years ago Ina Hoeschele ▴ 620
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1
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1.2k
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Answer: A: lumi: estimateMethylationBG problem
13.7 years ago Ina Hoeschele ▴ 620
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1.6k
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Comment: C: summarized expression values from beadarray versus GenomeStudio
13.8 years ago Ina Hoeschele ▴ 620
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1
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1.6k
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Comment: C: summarized expression values from beadarray versus GenomeStudio
13.8 years ago Ina Hoeschele ▴ 620
0
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1
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1.6k
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Comment: C: summarized expression values from beadarray versus GenomeStudio
13.8 years ago Ina Hoeschele ▴ 620
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6
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1.6k
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summarized expression values from beadarray versus GenomeStudio
Normalization beadarray Normalization beadarray
updated 13.8 years ago by ★ 1.1k • written 13.8 years ago by ▴ 620
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1
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1.9k
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Comment: C: limma complex contrast matrix
13.9 years ago Ina Hoeschele ▴ 620
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1
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1.8k
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Comment: C: problems installing lumi
13.9 years ago Ina Hoeschele ▴ 620
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1
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1.8k
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Comment: C: problems installing lumi
13.9 years ago Ina Hoeschele ▴ 620
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5
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1.8k
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problems installing lumi
lumi lumi
updated 13.9 years ago by ★ 8.2k • written 13.9 years ago by ▴ 620
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1
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1.9k
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Comment: C: limma complex contrast matrix
13.9 years ago Ina Hoeschele ▴ 620
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1
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1.9k
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Answer: A: limma complex contrast matrix
13.9 years ago Ina Hoeschele ▴ 620
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