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lncRNA
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how to convert lncRNA probe name or mRNA probe name to gene symbol
lncRNA
probeID
mRNA
genesymbol
16 months ago
Sooni
▴ 10
3
votes
3
replies
1.4k
views
Recount data for unannotated genes
recount
RNAseq
gencode
lncRNA
gene annotation
updated 5.2 years ago by
chris.wilks
▴ 70 • written 5.2 years ago by
francesco.gandolfi
▴ 20
0
votes
1
reply
1.5k
views
TPM and FPKM for lncRNA
GenomicFeatures
TPM
FPKM
lncRNA
6.0 years ago
Ina Hoeschele
▴ 620
0
votes
2
replies
3.1k
views
lncRNA annotation for featureCouns and STAR
lncRNA
featureCounts
STAR
annotation
updated 6.0 years ago by
Wei Shi
★ 3.6k • written 6.0 years ago by
inah
▴ 10
0
votes
2
replies
1.4k
views
R packages for differential expression analysis of raw data from arraystar microarrays
microarray
lncrna
microrna
mrna
raw data
updated 6.5 years ago by
Axel Klenk
★ 1.0k • written 6.5 years ago by
ntagaras
• 0
0
votes
3
replies
3.2k
views
Annotation DB for ArrayStar lncRNA arrays
arraystar
lncRNA
annotation
annotationdbi
updated 8.8 years ago by
xiangy7
• 0 • written 9.2 years ago by
Kevin Coombes
▴ 430
6 results • Page
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Answer: DESeq2 returns results for group with just one replicate
by
James W. MacDonald
66k
There is no problem having only one replicate per group, so long as you have replicates for other groups. The degrees of freedom are based …
Answer: Limma model.matrix design with batch effect and different life stages proportion
by
Masongeorge
• 0
Thanks for this post. i found it helpful for my own issue that was occurring on the backend of this page.
Comment: error loading collectTRI regulon
by
deeenes
▴ 40
I fixed the original, Ensembl HTTP 403 error only now, [see here][1]. If you've seen it gone earlier today, only shows that this error appe…
Answer: GESA with certain gene list returns no result with human genom, but many result
by
James W. MacDonald
66k
Ideally you would use something better than gene symbols for this. I realize that biologists like gene symbols, but they are really terribl…
Comment: Single Cell Experiment : Differential Expression "List of length 0" - Help!
by
vohara4
• 0
"label" refers to my clusters, so there shouldn't be one. Both samples have cells in every cluster
Votes
A: Scaling option in fastMNN
Answer: Behaviour of featureCounts when quantifying multi-mapping reads
Answer: Behaviour of featureCounts when quantifying multi-mapping reads
A: How to do a confounding variable adjustment without using the treatment informat
Answer: Behaviour of featureCounts when quantifying multi-mapping reads
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