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Showing :
subsetting
•
reset
1
vote
2
replies
2.1k
views
object of type 'externalptr' is not subsettable in R4.0 - with COM Object
r4.0
ComponentObjectModel
subsetting
2.4 years ago
Duy Duc
• 0
0
votes
5
replies
4.1k
views
Grange object subsetting using seqnames
Seqnames
makeGRangesFromDataFrame
GRanges
Subsetting
GenomicRanges
3.8 years ago
rtrivedi1
▴ 10
0
votes
2
replies
1.6k
views
DataFrame matrix subsetting
DataFrame
subsetting
S4Vectors
updated 6.2 years ago by
Hervé Pagès
16k • written 6.2 years ago by
felix.ernst
• 0
4
votes
7
replies
5.8k
views
removing rows from SingleCellExperiment container
sce
singlecellexperiment
scRNAseq
subsetting
updated 6.3 years ago by
Aaron Lun
★ 28k • written 6.3 years ago by
TJ
• 0
1
vote
1
reply
1.2k
views
Subsetting GRanges objext
GRanges
subsetting
updated 6.6 years ago by
James W. MacDonald
68k • written 6.6 years ago by
lalchungnungabt17
• 0
2
votes
5
replies
2.1k
views
rlog, lfcShrink and vst on gene subset
deseq2
subsetting
plot
updated 6.8 years ago by
Michael Love
43k • written 6.8 years ago by
giulia.pasquesi
▴ 10
1
vote
2
replies
1.7k
views
Subsetting GSE data with information from two different slots
GSE
subsetting
microarray
updated 7.4 years ago by
Axel Klenk
★ 1.1k • written 7.4 years ago by
A
▴ 60
3
votes
4
replies
7.0k
views
Subset GRanges object into new object
R
genomicranges
subsetting
7.4 years ago
jhanks1981
• 0
4
votes
3
replies
4.7k
views
subsetting GRanges object based on gene IDs
genomicranges
genomicfeatures
granges
subsetting
7.6 years ago
Assa Yeroslaviz
★ 1.5k
0
votes
1
reply
2.6k
views
Subsetting/subsequencing AAStringSet containing sequences of unequal length
biostrings
aastringset
subsetting
updated 7.9 years ago by
Hervé Pagès
16k • written 7.9 years ago by
bri.isabella
• 0
0
votes
1
reply
1.4k
views
HTqPCR: bug in subsetting qPCRset
HTqPCR
htqpcr
subsetting
updated 8.2 years ago by
henrik.seidel
▴ 40 • written 8.4 years ago by
Guido Hooiveld
★ 4.1k
0
votes
0
replies
1.1k
views
Subsetting and Transforming
subsetting
gate
flowcore
updated 8.2 years ago by
Martin Morgan
25k • written 8.2 years ago by
smajor
• 0
1
vote
2
replies
1.2k
views
VariantAnnotation CollapsedVCF trouble
variantannotation
subsetting
8.5 years ago
Fabian Grammes
▴ 20
1
vote
2
replies
2.3k
views
Subsetting GRanges based on metadata
GRanges
metadata
subsetting
updated 8.6 years ago by
Michael Lawrence
★ 11k • written 8.6 years ago by
mdeea123
▴ 10
3
votes
7
replies
7.4k
views
edgeR subsetting DGEList by column/sample
edger
subsetting
dgelist
updated 8.7 years ago by
Gordon Smyth
52k • written 8.7 years ago by
mnaymik
▴ 10
4
votes
4
replies
2.0k
views
Limma Elist subsetting
microarray
limma
subsetting
8.8 years ago
arfranco
▴ 130
4
votes
2
replies
1.7k
views
drop levels in eSet pData
subsetting
eSet
9.1 years ago
Shamim Sarhadi
▴ 20
0
votes
1
reply
1.5k
views
Inconsistent Subseting using norm2Filter in FlowCore
flowcore
gate
subsetting
filter
updated 9.6 years ago by
Jiang, Mike
★ 1.3k • written 9.6 years ago by
peterfoster
▴ 20
3
votes
2
replies
1.6k
views
Get a complete view of a long DNA sequence of a Biostrings object in R
biostrings
subsetting
View
dnastring
dnaseq
updated 9.6 years ago by
James W. MacDonald
68k • written 9.6 years ago by
arado1
• 0
2
votes
1
reply
1.4k
views
naiveRandRUV Error When k is 1
RUVNormalize
Subsetting
updated 9.8 years ago by
laurent.jacob
▴ 10 • written 9.9 years ago by
Dario Strbenac
★ 1.6k
20 results • Page
1 of 1
Recent ...
Replies
Comment: DESeq2 - human data, weird results, troubleshooting
by
bd2000
▴ 30
I didn't include all of my code the post would be too long. Here's a link to my GitHub if anyone would like to see the full code: [Full Rst…
Answer: DESeq: Gene is not flagged as differentially expressed despite count data showin
by
James W. MacDonald
68k
The simple answer is that the within-group variability is much higher for the first gene as compared to the second. The Wald statistic is j…
Comment: DESeq: Gene is not flagged as differentially expressed despite count data showin
by
ATpoint
★ 4.8k
> since there doesn't seem to be as much count variability, No? Your CD45 samples range on normalized scale from 2 to 3255. That's 3 orde…
Comment: Ensembl site unresponsive via biomaRt
by
darylruiz6545
• 0
Thank you so much for sharing the link.
Comment: compute_fasta_digest does not match Salmon index hash
by
Alex
• 0
I use the `fastaDigest` tool from [COMBINE-lab/fastaDigest](https://github.com/COMBINE-lab/FastaDigest/), which has the function `compute_f…
Votes
Answer: DESeq: Gene is not flagged as differentially expressed despite count data showin
Two EPIC Methylation Array Analysis Questions
How to get DMR for Infinium methylation EPIC v2
A: GEOquery Fails to Download Series Matrix File
Comment: Gene IDs conversion between Ensembl and NCBI nomenclature for non-model species
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