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Subsetting
•
reset
1
vote
2
replies
1.5k
views
object of type 'externalptr' is not subsettable in R4.0 - with COM Object
r4.0
ComponentObjectModel
subsetting
19 months ago • updated 18 months ago
Duy Duc
• 0
0
votes
5
replies
2.8k
views
Grange object subsetting using seqnames
Seqnames
makeGRangesFromDataFrame
GRanges
Subsetting
GenomicRanges
3.0 years ago
rtrivedi1
▴ 10
0
votes
2
replies
1.3k
views
DataFrame matrix subsetting
DataFrame
subsetting
S4Vectors
updated 5.4 years ago by
Hervé Pagès
16k • written 5.4 years ago by
felix.ernst
• 0
4
votes
7
replies
4.6k
views
removing rows from SingleCellExperiment container
sce
singlecellexperiment
scRNAseq
subsetting
updated 5.4 years ago by
Aaron Lun
★ 28k • written 5.4 years ago by
TJ
• 0
1
vote
1
reply
997
views
Subsetting GRanges objext
GRanges
subsetting
updated 5.8 years ago by
James W. MacDonald
66k • written 5.8 years ago by
lalchungnungabt17
• 0
2
votes
5
replies
1.8k
views
rlog, lfcShrink and vst on gene subset
deseq2
subsetting
plot
updated 6.0 years ago by
Michael Love
42k • written 6.0 years ago by
giulia.pasquesi
▴ 10
1
vote
2
replies
1.3k
views
Subsetting GSE data with information from two different slots
GSE
subsetting
microarray
updated 6.6 years ago by
Axel Klenk
★ 1.0k • written 6.6 years ago by
A
▴ 40
3
votes
4
replies
6.2k
views
Subset GRanges object into new object
R
genomicranges
subsetting
6.6 years ago
jhanks1981
• 0
4
votes
3
replies
4.0k
views
subsetting GRanges object based on gene IDs
genomicranges
genomicfeatures
granges
subsetting
6.8 years ago
Assa Yeroslaviz
★ 1.5k
0
votes
1
reply
2.1k
views
Subsetting/subsequencing AAStringSet containing sequences of unequal length
biostrings
aastringset
subsetting
updated 7.1 years ago by
Hervé Pagès
16k • written 7.1 years ago by
bri.isabella
• 0
0
votes
1
reply
1.3k
views
HTqPCR: bug in subsetting qPCRset
HTqPCR
htqpcr
subsetting
updated 7.4 years ago by
henrik.seidel
▴ 40 • written 7.6 years ago by
Guido Hooiveld
★ 4.0k
0
votes
0
replies
954
views
Subsetting and Transforming
subsetting
gate
flowcore
updated 7.4 years ago by
Martin Morgan
25k • written 7.4 years ago by
smajor
• 0
1
vote
2
replies
980
views
VariantAnnotation CollapsedVCF trouble
variantannotation
subsetting
7.7 years ago
Fabian Grammes
▴ 20
1
vote
2
replies
2.1k
views
Subsetting GRanges based on metadata
GRanges
metadata
subsetting
updated 7.8 years ago by
Michael Lawrence
★ 11k • written 7.8 years ago by
mdeea123
▴ 10
3
votes
7
replies
6.7k
views
edgeR subsetting DGEList by column/sample
edger
subsetting
dgelist
updated 7.9 years ago by
Gordon Smyth
51k • written 7.9 years ago by
mnaymik
▴ 10
4
votes
4
replies
1.7k
views
Limma Elist subsetting
microarray
limma
subsetting
8.0 years ago
arfranco
▴ 130
4
votes
2
replies
1.5k
views
drop levels in eSet pData
subsetting
eSet
8.3 years ago
Shamim Sarhadi
▴ 20
0
votes
1
reply
1.3k
views
Inconsistent Subseting using norm2Filter in FlowCore
flowcore
gate
subsetting
filter
updated 8.7 years ago by
Jiang, Mike
★ 1.3k • written 8.7 years ago by
peterfoster
▴ 20
3
votes
2
replies
1.4k
views
Get a complete view of a long DNA sequence of a Biostrings object in R
biostrings
subsetting
View
dnastring
dnaseq
updated 8.8 years ago by
James W. MacDonald
66k • written 8.8 years ago by
arado1
• 0
2
votes
1
reply
1.2k
views
naiveRandRUV Error When k is 1
RUVNormalize
Subsetting
updated 9.0 years ago by
laurent.jacob
▴ 10 • written 9.1 years ago by
Dario Strbenac
★ 1.5k
20 results • Page
1 of 1
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Replies
Answer: DESeq2 returns results for group with just one replicate
by
James W. MacDonald
66k
There is no problem having only one replicate per group, so long as you have replicates for other groups. The degrees of freedom are based …
Answer: Limma model.matrix design with batch effect and different life stages proportion
by
Masongeorge
• 0
Thanks for this post. i found it helpful for my own issue that was occurring on the backend of this page.
Comment: error loading collectTRI regulon
by
deeenes
▴ 40
I fixed the original, Ensembl HTTP 403 error only now, [see here][1]. If you've seen it gone earlier today, only shows that this error appe…
Answer: GESA with certain gene list returns no result with human genom, but many result
by
James W. MacDonald
66k
Ideally you would use something better than gene symbols for this. I realize that biologists like gene symbols, but they are really terribl…
Comment: Single Cell Experiment : Differential Expression "List of length 0" - Help!
by
vohara4
• 0
"label" refers to my clusters, so there shouldn't be one. Both samples have cells in every cluster
Votes
A: Scaling option in fastMNN
Answer: Behaviour of featureCounts when quantifying multi-mapping reads
Answer: Behaviour of featureCounts when quantifying multi-mapping reads
A: How to do a confounding variable adjustment without using the treatment informat
Answer: Behaviour of featureCounts when quantifying multi-mapping reads
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