Bioconductor Split

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votes

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2.5k

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GenomicRanges split chromosome TxDb

updated 3.2 years ago by Hervé Pagès 16k • written 3.2 years ago by jon.klonowski ▴ 40

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1.3k

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flowStats newbie split subset flowCore

6.5 years ago yulia.chupalova • 0

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1.5k

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granges genomicranges split

written 7.8 years ago by gaiusjaugustus • 0

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1.6k

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iranges fasta split

updated 8.1 years ago by Michael Lawrence ★ 11k • written 8.1 years ago by Assa Yeroslaviz ★ 1.5k

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1.2k

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r granges split performance

updated 8.4 years ago by Michael Lawrence ★ 11k • written 8.4 years ago by Jurat Shahidin ▴ 80

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8.3k

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granges split r

updated 3.2 years ago by jon.klonowski ▴ 40 • written 9.1 years ago by Jurat Shahidin ▴ 80

6 results • Page 1 of 1

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Comment: error in ChAMP loading file by shocked.tick.zyet • 0

Great troubleshooting steps for ChAMP import issues! "ChAMP methylation data import errors" on [Google Search][1] for similar cases. Header…

Comment: orgDB by jenniferping36 • 0

Thanks for the suggestion! I'll check out the resources.

Comment: sesameDataCache is not work properly on my system by Samreen • 0

Any luck with this? I have tried all of the above and it still doesn't work. This is my session info and I'm on a cluster computing environ…

Answer: Using tximport for kallisto aligned TOIL data by James W. MacDonald 68k

If you just have the transcript data, you probably don't need (and maybe cannot use) `tximport`. Instead you could just do the naive thing …

Answer: Reading gene expression data in GPR format and converting it to xlsx format by James W. MacDonald 68k

Setting aside the inadvisability of putting these data into Excel (and I should point out that these data are not single-cell, but instead …

Votes

Answer: Differential expression of proteins using somascan data

Answer: Surprising behavior for DEXseq dispersion estimate plot?

Answer: Handle zero effective gene length when tximport RSEM results

Handle zero effective gene length when tximport RSEM results

How to remove genes with 0 counts in tximport?

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