Bioconductor Chromosome

Showing : chromosome • reset

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607

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gene chromosome proteincodinggene

14 months ago Liliian • 0

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1.9k

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GenomicRanges split chromosome TxDb

updated 2.5 years ago by Hervé Pagès 16k • written 2.5 years ago by jon.klonowski ▴ 40

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10k

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SNP rs id Biomart Chromosome coordinates

updated 11 months ago by James W. MacDonald 66k • written 3.8 years ago by Mahan • 0

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804

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Chromosome Annotation

updated 3.9 years ago by James W. MacDonald 66k • written 3.9 years ago by Bine ▴ 50

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811

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tximport GCF feature table parsing error chromosome

updated 4.2 years ago by Michael Love 42k • written 4.2 years ago by knholm • 0

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531

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RefSeq Chromosome Mutalyzer

4.2 years ago heiko_kin ▴ 60

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510

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edgeR chromosome RNAseq

updated 4.2 years ago by swbarnes2 ★ 1.4k • written 4.2 years ago by missmoparker • 0

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804

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homo sapiens chromosome

updated 6.0 years ago by James W. MacDonald 66k • written 6.0 years ago by xchen8 • 0

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1.9k

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bsgenome chromosome reference genome

updated 6.3 years ago by Hervé Pagès 16k • written 6.3 years ago by Nathan Sheffield ▴ 10

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2.5k

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Gviz chromosome ideogram

updated 7.3 years ago by bernatgel ▴ 150 • written 7.3 years ago by dulunar ▴ 10

10 results • Page 1 of 1

Recent ...

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Comment: GESA with certain gene list returns no result with human genom, but many result by sawa • 0

Thank you so much! I did not know the rule that human genes are written in upper case and mouse in first letter capitalized format. When I …

Comment: Odd behavior of Rsubread::featureCounts when setting `nonOverlap = 0` by isaac.vock • 0

Thank you for looking into this and for your explanation! As a follow-up, would it be possible in future releases of featureCounts to pro…

Comment: error loading collectTRI regulon by silvaesilva.da • 0

Fantastic. Thank you very much. Everything has been sorted out

Answer: DESeq2 returns results for group with just one replicate by James W. MacDonald 66k

There is no problem having only one replicate per group, so long as you have replicates for other groups. The degrees of freedom are based …

Answer: Limma model.matrix design with batch effect and different life stages proportion by Masongeorge • 0

Thanks for this post. i found it helpful for my own issue that was occurring on the backend of this page.

Votes

Answer: GESA with certain gene list returns no result with human genom, but many result

Answer: Odd behavior of Rsubread::featureCounts when setting `nonOverlap = 0`

Answer: DESeq2 returns results for group with just one replicate

Comment: error loading collectTRI regulon

Awards • All

Scholar to James W. MacDonald 66k