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675
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News:
Bioconductor 3.20 is Released!
Bioconductor
Release
Software
4 months ago
shepherl
4.1k
0
votes
0
replies
259
views
News:
List of Deprecated Packages for Bioc3.20
Devel
Bioconductor
Release
4 months ago
shepherl
4.1k
0
votes
11
replies
1.8k
views
News:
List of Deprecated Packages for Bioc3.19
Release
Devel
ExperimentData
Software
12 months ago • updated 4 months ago
shepherl
4.1k
3
votes
3
replies
1.5k
views
News:
Bioconductor 3.20 Release Schedule
software
release
Release
updated 4 months ago by
Gordon Smyth
52k • written 5 months ago by
shepherl
4.1k
4
votes
0
replies
1.0k
views
News:
Bioconductor 3.19 is Released!
Release
Bioconductor
Packages
Software
10 months ago
shepherl
4.1k
0
votes
0
replies
576
views
News:
Important Release 3.18 Freeze Announcment
Release
release
Bioconductor
Bioconducto
10 months ago
shepherl
4.1k
0
votes
1
reply
1.1k
views
News:
Bioconductor 3.19 Release Schedule
Release
release
Software
12 months ago • updated 11 months ago
shepherl
4.1k
0
votes
1
reply
806
views
Rcpp compilation error
Release
Rcpp
updated 12 months ago by
ATpoint
★ 4.7k • written 12 months ago by
Robert K. Bradley
▴ 40
0
votes
0
replies
875
views
News:
Note about packages submitted for Bioconductor 3.19
Release
Submission
release
Bioconductor
13 months ago
shepherl
4.1k
5
votes
1
reply
1.4k
views
News:
Bioconductor 3.18 is Released!
Packages
Bioconductor
Release
Software
written 16 months ago by
shepherl
4.1k
1
vote
4
replies
909
views
rnaSeqGene workflow not available in Bioconductor 3.18
rnaseqGene
Bioconductor3.18
DifferentialExpression
release
updated 16 months ago by
Michael Love
43k • written 16 months ago by
Nadine
▴ 60
0
votes
4
replies
1.6k
views
News:
Important Bioconductor Release 3.18 deadlines this week
Release
Devel
release
devel
updated 16 months ago by
Guido Hooiveld
★ 4.1k • written 16 months ago by
shepherl
4.1k
1
vote
0
replies
1.1k
views
News:
Bioconductor 3.18 db0s, OrgDbs, and TxDbs now available
db0
release
Annotation
17 months ago
kayla.interdonato
▴ 160
0
votes
0
replies
1.2k
views
News:
Bioconductor 3.18 Release Schedule
Release
Software
release
18 months ago
shepherl
4.1k
1
vote
8
replies
1.8k
views
News:
Final List of Deprecated Package Bioc 3.9
deprecation
release
software
experimentData
News
written 5.9 years ago by
shepherl
4.1k
0
votes
0
replies
973
views
News:
Bioconductor 3.17 is Released!
Packages
Release
Bioconductor
Software
22 months ago
shepherl
4.1k
0
votes
0
replies
704
views
News:
Bioconductor Release 3.16 Code Freeze
release
Release
Bioconductor
23 months ago
shepherl
4.1k
0
votes
0
replies
1.1k
views
News:
Bioconductor 3.17 db0s, OrgDbs, and TxDbs now available
release
db0
Annotation
23 months ago
kayla.interdonato
▴ 160
0
votes
0
replies
861
views
News:
Bioconductor 3.17 Release Schedule
Softwar
Release
Bioconductor
release
Software
24 months ago • updated 23 months ago
shepherl
4.1k
1
vote
0
replies
1.2k
views
News:
Bioconductor 3.16 is Released!
Release
Packages
Bioconductor
Software
2.3 years ago
shepherl
4.1k
0
votes
0
replies
788
views
News:
Last day to make commits before Release 3.16
Release
Devel
Bioconductor
release
devel
2.3 years ago
shepherl
4.1k
0
votes
2
replies
1.1k
views
News:
List of Deprecated Packages for Bioc3.16
Release
Deprecation
Devel
Bioconductor
2.4 years ago
shepherl
4.1k
0
votes
0
replies
978
views
News:
New Package Submission Deadline Tomorrow for Bioconductor 3.16
Release
Devel
Bioconductor
Software
2.4 years ago
shepherl
4.1k
0
votes
0
replies
1.1k
views
News:
Bioconductor 3.16 db0s, OrgDbs and TxDbs now available
release
db0
annotation
2.4 years ago
kayla.interdonato
▴ 160
4
votes
0
replies
997
views
News:
Bioconductor Release 3.16 Schedule
Release
Devel
packages
release
devel
2.5 years ago
shepherl
4.1k
8
votes
0
replies
1.2k
views
News:
Bioconductor 3.15 is Released!
Software
Release
Packages
Bioconductor
2.9 years ago • updated 2.8 years ago
shepherl
4.1k
0
votes
4
replies
1.6k
views
News:
List of Deprecated Packages for Bioc3.15
Devel
Deprecation
Release
Bioconductor
2.9 years ago • updated 2.4 years ago
shepherl
4.1k
0
votes
1
reply
1.3k
views
News:
Bioconductor 3.15 db0s, OrgDbs and TxDbs now available
annotation
release
db0
2.9 years ago
kayla.interdonato
▴ 160
0
votes
0
replies
850
views
News:
New Package Submission Deadline Tomorrow for Bioconductor 3.15
Release
Software
Bioconductor
Devel
2.9 years ago
shepherl
4.1k
1
vote
0
replies
1.1k
views
News:
Bioconductor Release 3.15 Schedule
Devel
release
packages
Release
devel
3.0 years ago
shepherl
4.1k
0
votes
5
replies
1.7k
views
News:
Final List of Deprecated Packages for Bioc3.14
ExperimentData
Deprecation
Software
Release
Workflow
3.4 years ago • updated 2.9 years ago
shepherl
4.1k
8
votes
0
replies
1.2k
views
News:
Bioconductor 3.14 is Released!
release
Packages
Software
Release
Bioconductor
3.4 years ago • updated 3.3 years ago
shepherl
4.1k
0
votes
0
replies
1.0k
views
News:
New Package Submission Deadline for Bioc Release 3.14
newpackage
Deadline
Release
Submission
3.5 years ago
shepherl
4.1k
1
vote
0
replies
1.2k
views
News:
Bioconductor Release 3.14 Schedule
devel
Devel
release
packages
Release
3.5 years ago
shepherl
4.1k
7
votes
6
replies
2.1k
views
How to obtain summary statistics for all Bioc releases
bioconductor
release
6.8 years ago
Robert Ivanek
▴ 750
5
votes
0
replies
1.2k
views
News:
Bioconductor 3.13 is Released!
Release
Bioconductor
Packages
Software
3.8 years ago
shepherl
4.1k
0
votes
0
replies
917
views
News:
Last day to make commit before the RELEASE_3_13
Release
Devel
devel
release
Bioc3.13
3.8 years ago
shepherl
4.1k
0
votes
3
replies
1.4k
views
Bioconductor Release AMI's
Release
release
AWS
AMI
Bioconductor
updated 3.8 years ago by
Vincent J. Carey, Jr.
6.7k • written 3.8 years ago by
shepherl
4.1k
1
vote
0
replies
1.2k
views
News:
Bioconductor 3.13 db0s, OrgDbs and TxDbs now available
annotation
release
db0
3.8 years ago
kayla.interdonato
▴ 160
1
vote
1
reply
1.3k
views
Rsync Access
release
rsync
873
updated 3.8 years ago by
Martin Morgan
25k • written 3.9 years ago by
workmanld
▴ 10
0
votes
1
reply
1.3k
views
News:
Bioconductor 3.13 New Package Submission Deadline
release
Submission
newpackage
Release
Deadline
3.9 years ago
shepherl
4.1k
0
votes
0
replies
1.0k
views
News:
Bioconductor Release 3.12 and Bioconductor Devel 3.13 Code Freeze Deadlines!
Bioconductor
release
devel
deadline
3.9 years ago • updated 3.8 years ago
shepherl
4.1k
0
votes
0
replies
1.2k
views
News:
Bioconductor Release 3.13 Schedule
release
Release
3.9 years ago
shepherl
4.1k
4
votes
0
replies
1.2k
views
News:
Bioconductor 3.12 is Released!
Software
release
Bioconductor
Packages
Release
4.3 years ago
shepherl
4.1k
0
votes
1
reply
1.3k
views
News:
Bioconductor 3.12 db0s, OrgDbs and TxDbs now available
annotation
db0
news
release
News
4.4 years ago
kayla.interdonato
▴ 160
1
vote
0
replies
1.3k
views
News:
New Package Submission Deadline for Bioc Release 3.12
release
new package
submission
deadline
News
4.4 years ago
shepherl
4.1k
0
votes
0
replies
1.3k
views
News:
Bioconductor Release 3.12 Schedule Posted
packages
release
deadlines
builds
News
4.5 years ago
shepherl
4.1k
1
vote
1
reply
1.2k
views
News:
Issues with annotation packages
annotation
news
release
News
4.8 years ago
kayla.interdonato
▴ 160
0
votes
0
replies
1.2k
views
News:
Bioconductor 3.11 OrgDb and TxDb packages now available
annotation
news
release
News
4.8 years ago
kayla.interdonato
▴ 160
4
votes
0
replies
1.0k
views
News:
Bioconductor 3.11 is Released!
software
bioconductor
release
packages
News
4.8 years ago
shepherl
4.1k
50 results • Page
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Comment: how many significant figures are there in DESeq2 output
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ATpoint
★ 4.7k
If you want consistency then use a fixed software environment like Docker, wirh fixed code and thresholds that make sense. Rounding to near…
Comment: Compare TCGA-PAAD with GTEx gene expression
by
Jane
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why aren't there any answers?
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I encountered the same issue: too many DEGs after limma analysis. It is sad that until today we can still see the paper published where GTE…
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Thank you for your reply. It is good to know that cutoff of 0.05 means less than 0.05. My concerns are about consistency and reproducibili…
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No, normalization factors from edgeR rather than size factors from DESeq2 are not proportional, it's a different concept and implementation…
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Unbalanced experiment with multiple samples from each patient.
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