Bioconductor Junctionseq

Showing : junctionseq • reset

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1.4k

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DEXSeq JunctionSeq RNAseq QoRTs

4.0 years ago • updated 3.9 years ago n.tear ▴ 20

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1.0k

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junctionseq splicing RNAseq DEXSeq

5.2 years ago stuart ▴ 10

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960

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JunctionSeq

7.8 years ago rachelrodgers12 • 0

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971

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junctionseq relevel reference

8.0 years ago Assa Yeroslaviz ★ 1.5k

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1.1k

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junctionseq qorts multiple factor design relevel

8.0 years ago Assa Yeroslaviz ★ 1.5k

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deseq2 junctionseq dexseq estimatedispersions rnaseq

updated 8.2 years ago by Steve Lianoglou ★ 13k • written 8.2 years ago by l.frank • 0

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961

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junctionseq

8.2 years ago jbono ▴ 10

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junctionseq design and contrast matrix

8.3 years ago stuart • 0

8 results • Page 1 of 1

Recent ...

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Answer: DESeq2 adujsted p-value cutoff seemingly not working by James W. MacDonald 68k

From `?results' ``` On p-values: By default, independent filtering is performed to select a set of genes for multiple tes…

Comment: Issue with assigning transcript IDs to reads when using summarizeOverlaps(mode = by SofieK • 0

Thank you, I will try this and see.

Comment: DiffBind - question on the use of filtered or unfiltered input data by deltaexploitss • 0

Data input is the adding of data into a computer. This can take place through an input device such as a keyboard. A user inputs data, which…

Comment: GenomeInfoDbData cannot install in R and warning had non-zero exit status by Renuka • 0

how you did it pls explain

Answer: Issue with assigning transcript IDs to reads when using summarizeOverlaps(mode = by James W. MacDonald 68k

If I understand correctly, you want to assess differential transcript abundances. If so, there are a couple of ways you can do that. One wa…

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A: Effect of lfcThreshold on p-value in DESeq2

Answer: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet

What benchmark should I use for setting the EdgeR filterByExpr min.count parameter?

Answer: Issue with assigning transcript IDs to reads when using summarizeOverlaps(mode =

Comment: Unused arguments error without used arguments in GSVA?

Awards • All

Teacher to Gordon Smyth 52k

Scholar to James W. MacDonald 68k