Showing : heatmaps • reset
0
votes
1
reply
752
views
Error when trying to create a heatmap with DESeq2
Heatmap RNA-seqanalysis heatmaps DESeq2
updated 6 months ago by ▴ 780 • written 6 months ago by • 0
0
votes
1
reply
889
views
edgeR heatmap construction and interpretation
heatmaps
updated 7 months ago by 50k • written 7 months ago by • 0
0
votes
3
replies
598
views
Installing Gpart
gpart heat heatmaps
updated 7 months ago by 65k • written 7 months ago by • 0
0
votes
2
replies
643
views
Drawing a heatmap with only limited genes
heatmaps
updated 10 months ago by • 0 • written 10 months ago by • 0
1
vote
1
reply
516
views
Add 'ColSideColors' using 'heatmap.2' function
ColSideColors heatmaps heatmap.2
updated 13 months ago by ▴ 80 • written 14 months ago by ▴ 10
0
votes
1
reply
640
views
Heatmap of two conditions from the normalized gene count data
GeneExpression heatmaps
updated 14 months ago by ★ 4.1k • written 14 months ago by • 0
0
votes
2
replies
902
views
How to use the plotExprHeatmap function to draw heat maps according to groups
grou heatmaps CyTOFpower cytofWorkflow
14 months ago shuangshuang • 0
0
votes
0
replies
845
views
WGCNA Heatmap and Export to Cytoscape Not Working
Cytoscape Heatmap heatmaps WGCNA
15 months ago gianni.drm • 0
0
votes
1
reply
643
views
struggling to create a heatmap
DESeq2 heatmaps
updated 15 months ago by ★ 4.1k • written 15 months ago by ▴ 10
2
votes
3
replies
1.0k
views
How can I draw a barplot of complexheatmap according 'Tumor Type'
heatma heatmaps ComplexHeatmap
updated 15 months ago by ▴ 40 • written 15 months ago by ▴ 10
2
votes
2
replies
634
views
[DESeq2] There is no difference in expression in my heatmap
DESeq2 heatmaps
15 months ago Sooni ▴ 10
2
votes
5
replies
3.3k
views
How to identify top most variable genes from log2 normalized data?
supervised edgeR variance RNASeq heatmaps
updated 15 months ago by 50k • written 16 months ago by ▴ 10
2
votes
5
replies
1.6k
views
ComplexHeatmap - z-score color coding failed
heatmaps ComplexHeatmap
17 months ago Katharina • 0
0
votes
1
reply
2.2k
views
Heatmap with result DESeq analysis
DESeq2 results Heatmaps plots
updated 19 months ago by 42k • written 19 months ago by • 0
0
votes
3
replies
1.2k
views
Generate Heatmap from Gene Names after DESEQ2
DESeq2 DESEQ2 tximeta SummarizedExperiment heatmaps
updated 20 months ago by 65k • written 20 months ago by • 0
0
votes
1
reply
1.5k
views
Complex Heatmap - correlation matrix - how to have exact same annotation with same colors for rows and columns?
R heatmaps ComplexHeatmap Heatma
updated 20 months ago by ▴ 260 • written 21 months ago by • 0
1
vote
1
reply
999
views
How fix lines of dendrogram that overlap in the column portion of a heatmap?
heat heatmaps
updated 22 months ago by 65k • written 22 months ago by • 0
0
votes
2
replies
3.9k
views
Scaling for p.heatmap
heatmaps pheatmap scaling
23 months ago • updated 22 months ago Bhavana • 0
0
votes
3
replies
1.3k
views
Persisting error in making a heatmap
heatmaps gplots
23 months ago beslinail • 0
1
vote
1
reply
788
views
Method for generating heatmap of overlapping DEGs?
heatm heatmaps
updated 2.1 years ago by 65k • written 2.1 years ago by • 0
0
votes
1
reply
1.1k
views
Help me do a gene enrichment analysis
DESeq2 topGO heatmaps
updated 2.7 years ago by ▴ 40 • written 2.7 years ago by • 0
0
votes
2
replies
1.7k
views
PCA and heatmaps: most variable genes selection
DESeq2 ExpressionData heatmaps pca
2.9 years ago Clara • 0
0
votes
1
reply
2.4k
views
Can you colour dendrogram branch clusters in pheatmap?
R heatmaps pheatmap
updated 3.2 years ago by ★ 3.9k • written 3.2 years ago by ▴ 10
1
vote
1
reply
852
views
PCA rand heatmap of raw data
DESeq2 DiffSeq PrincipalComponent rlog heatmaps
updated 3.2 years ago by 42k • written 3.2 years ago by ▴ 30
4
votes
5
replies
1.4k
views
DEseq2 results
heatmaps DEGs PCA
updated 3.2 years ago by ★ 3.9k • written 3.2 years ago by • 0
0
votes
0
replies
725
views
How to generate input file for Bioconductor package heatmaps
heatmaps input file
updated 5.2 years ago by 65k • written 5.2 years ago by ▴ 10
26 results • Page 1 of 1
Recent ...
Replies
Comment: Ensembl plants at annotationHub? by Daniele • 0
Dear Johannes, Would it be possible to create the EnsDb for Triticum aestivum (IWGSC)? Thank you very much, Daniele
Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools by BioinfGuru ▴ 30
Figured it out with ?eigencorplot, thanks Michael. I was trying to pass 10 PCs when I only had 8, and I was including metadata columns that…
Answer: DECIPHER::idTaxa - broken link to download GTDB r220 (modified) trainig set by makala • 0
Thanks a lot!
Comment: DECIPHER::idTaxa - broken link to download GTDB r220 (modified) trainig set by Erik Wright ▴ 150
Thanks for notifying us of this broken link. It should be fixed on the Downloads page now. [1] [1]: http://www2.decipher.codes/Classificat…
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa by Matthew Thornton ▴ 360
So it turns out that if the count and the size are the same in 'GOstats", the odds ratio is 'inf'. These are causing the issue. Thank you!!
Votes
Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
Rsubread counting peaks ATACseq
Comment: Can DESeq2 rlog normalized matrix reflects time course result directly?
Awards • All
Popular Question to Chris ▴ 10
Popular Question to Guido Hooiveld ★ 4.0k
Scholar to Michael Love 42k
Popular Question to Vincent J. Carey, Jr. 6.7k
Popular Question to boczniak767 ▴ 720
Locations • All
WEHI, Melbourne, Australia, 5 minutes ago
Hong Kong, 28 minutes ago
United States, 39 minutes ago
Melbourne, Australia, 54 minutes ago
United States, 1 hour ago
Traffic: 440 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6