Showing : heatmaps • reset
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DESeq2 Heatmap
heatmaps
updated 3 months ago by ★ 1.4k • written 3 months ago by • 0
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3
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1.1k
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Label specific rows in pheatmap
heatmaps pheatmap
updated 6 months ago by 68k • written 6 months ago by ▴ 50
1
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5
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1.8k
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Heatmap from the output of GSEA clusterProfiler?
clusterProfiler heatmaps
written 8 months ago by • 0
2
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1
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1.2k
views
DESeq2 is it OK to scale transformed data in order to plot heatmaps?
DESeq2 heatmaps
updated 8 months ago by ★ 4.8k • written 8 months ago by • 0
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316
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Error in drawHeatmap function
GeneOverlap heatmaps
10 months ago Johanna • 0
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2
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1.0k
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Cluster columns in Pheatmap
geneexp pheatmap heatmaps cluster
updated 11 months ago by 68k • written 11 months ago by • 0
0
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1
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2.2k
views
Error when trying to create a heatmap with DESeq2
Heatmap RNA-seqanalysis heatmaps DESeq2
updated 18 months ago by ▴ 780 • written 18 months ago by • 0
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2.4k
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edgeR heatmap construction and interpretation
heatmaps
updated 18 months ago by 52k • written 18 months ago by • 0
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3
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1.1k
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Installing Gpart
gpart heat heatmaps
updated 18 months ago by 68k • written 18 months ago by • 0
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2
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1.1k
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Drawing a heatmap with only limited genes
heatmaps
updated 22 months ago by • 0 • written 22 months ago by • 0
1
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1
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793
views
Add 'ColSideColors' using 'heatmap.2' function
ColSideColors heatmaps heatmap.2
updated 2.1 years ago by ▴ 80 • written 2.1 years ago by ▴ 10
0
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1
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992
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Heatmap of two conditions from the normalized gene count data
GeneExpression heatmaps
updated 2.1 years ago by ★ 4.8k • written 2.2 years ago by • 0
0
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2
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1.5k
views
How to use the plotExprHeatmap function to draw heat maps according to groups
grou heatmaps CyTOFpower cytofWorkflow
2.2 years ago shuangshuang • 0
0
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0
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1.4k
views
WGCNA Heatmap and Export to Cytoscape Not Working
Cytoscape Heatmap heatmaps WGCNA
2.2 years ago gianni.drm • 0
0
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1
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1.1k
views
struggling to create a heatmap
DESeq2 heatmaps
updated 2.2 years ago by ★ 4.8k • written 2.2 years ago by ▴ 10
2
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3
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1.7k
views
How can I draw a barplot of complexheatmap according 'Tumor Type'
heatma heatmaps ComplexHeatmap
updated 2.3 years ago by ▴ 40 • written 2.3 years ago by ▴ 10
2
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2
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1.0k
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[DESeq2] There is no difference in expression in my heatmap
DESeq2 heatmaps
2.3 years ago Sooni ▴ 10
4
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5
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5.9k
views
How to identify top most variable genes from log2 normalized data?
supervised edgeR variance RNASeq heatmaps
updated 2.2 years ago by 52k • written 2.3 years ago by ▴ 10
2
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5
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2.4k
views
ComplexHeatmap - z-score color coding failed
heatmaps ComplexHeatmap
2.4 years ago Katharina • 0
0
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1
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3.9k
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Heatmap with result DESeq analysis
DESeq2 results Heatmaps plots
updated 2.5 years ago by 43k • written 2.6 years ago by • 0
0
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3
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2.0k
views
Generate Heatmap from Gene Names after DESEQ2
DESeq2 DESEQ2 tximeta SummarizedExperiment heatmaps
updated 2.6 years ago by 68k • written 2.6 years ago by • 0
0
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1
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2.3k
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Complex Heatmap - correlation matrix - how to have exact same annotation with same colors for rows and columns?
R heatmaps ComplexHeatmap Heatma
updated 2.7 years ago by ▴ 290 • written 2.7 years ago by • 0
1
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1
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1.5k
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How fix lines of dendrogram that overlap in the column portion of a heatmap?
heat heatmaps
updated 2.8 years ago by 68k • written 2.8 years ago by • 0
0
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2
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7.4k
views
Scaling for p.heatmap
heatmaps pheatmap scaling
2.8 years ago Bhavana • 0
0
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3
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1.8k
views
Persisting error in making a heatmap
heatmaps gplots
2.9 years ago beslinail • 0
1
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1
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1.1k
views
Method for generating heatmap of overlapping DEGs?
heatm heatmaps
updated 3.0 years ago by 68k • written 3.0 years ago by • 0
0
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1
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1.5k
views
Help me do a gene enrichment analysis
DESeq2 topGO heatmaps
updated 3.7 years ago by ▴ 40 • written 3.7 years ago by • 0
0
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2
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2.2k
views
PCA and heatmaps: most variable genes selection
DESeq2 ExpressionData heatmaps pca
3.9 years ago Clara ▴ 10
0
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1
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3.3k
views
Can you colour dendrogram branch clusters in pheatmap?
R heatmaps pheatmap
updated 4.2 years ago by ★ 4.0k • written 4.2 years ago by ▴ 10
1
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1
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1.2k
views
PCA rand heatmap of raw data
DESeq2 DiffSeq PrincipalComponent rlog heatmaps
updated 4.2 years ago by 43k • written 4.2 years ago by ▴ 30
4
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5
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1.8k
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DEseq2 results
heatmaps DEGs PCA
updated 4.2 years ago by ★ 4.0k • written 4.2 years ago by • 0
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0
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929
views
How to generate input file for Bioconductor package heatmaps
heatmaps input file
updated 6.2 years ago by 68k • written 6.2 years ago by ▴ 10
32 results • Page 1 of 1
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Comment: Design formula for circadian time-course data for vst() function by Vishnu • 0
Thank you so much for your reply.
Comment: Analyzing TnSeq data with DESeq2 by Tom • 0
[Doncaster Locksmith][1] delivers trusted, efficient security services tailored to your needs. Analyzing TnSeq data with DESeq2 may uncover…
Answer: Design formula for circadian time-course data for vst() function by ATpoint ★ 4.8k
This was asked before: https://support.bioconductor.org/p/9148734/#9148812 Take-home message is that influence is minor, as you see your…
Comment: Filtering after DESeq by caroline.zanchi • 0
... I did it. It does filter out quite a bit of genes : ``` keep <- filterByExpr(dds, group="host_treatment_generation",min.count = 10, mi…
Comment: Module membership vs gene significance result and Modules-trait relationships re by Vinaya • 0
Hi. I am having the same issue, and haven't found a solution still.
Votes
Answer: CluserProfiler message "No gene can be mapped"
A: Minfi issue: return code from pthread_create() is 22
Comment: Filtering after DESeq
Answer: DiffBind; Error: No sites have activity greater than filter value
DiffBind; Error: No sites have activity greater than filter value
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