Showing : heatmaps • reset
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DESeq2 Heatmap
heatmaps
updated 23 days ago by ★ 1.4k • written 23 days ago by • 0
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3
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571
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Label specific rows in pheatmap
heatmaps pheatmap
updated 3 months ago by 68k • written 3 months ago by ▴ 50
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5
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1.4k
views
Heatmap from the output of GSEA clusterProfiler?
clusterProfiler heatmaps
written 5 months ago by • 0
2
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1
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772
views
DESeq2 is it OK to scale transformed data in order to plot heatmaps?
DESeq2 heatmaps
updated 5 months ago by ★ 4.6k • written 5 months ago by • 0
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269
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Error in drawHeatmap function
GeneOverlap heatmaps
8 months ago • updated 7 months ago Johanna • 0
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2
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788
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Cluster columns in Pheatmap
geneexp pheatmap heatmaps cluster
updated 8 months ago by 68k • written 8 months ago by • 0
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1
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1.8k
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Error when trying to create a heatmap with DESeq2
Heatmap RNA-seqanalysis heatmaps DESeq2
updated 15 months ago by ▴ 780 • written 15 months ago by • 0
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2.0k
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edgeR heatmap construction and interpretation
heatmaps
updated 15 months ago by 52k • written 15 months ago by • 0
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3
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1.0k
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Installing Gpart
gpart heat heatmaps
updated 16 months ago by 68k • written 16 months ago by • 0
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2
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1.0k
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Drawing a heatmap with only limited genes
heatmaps
updated 19 months ago by • 0 • written 19 months ago by • 0
1
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734
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Add 'ColSideColors' using 'heatmap.2' function
ColSideColors heatmaps heatmap.2
updated 22 months ago by ▴ 80 • written 23 months ago by ▴ 10
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1
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923
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Heatmap of two conditions from the normalized gene count data
GeneExpression heatmaps
updated 23 months ago by ★ 4.6k • written 23 months ago by • 0
0
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2
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1.4k
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How to use the plotExprHeatmap function to draw heat maps according to groups
grou heatmaps CyTOFpower cytofWorkflow
23 months ago shuangshuang • 0
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1.2k
views
WGCNA Heatmap and Export to Cytoscape Not Working
Cytoscape Heatmap heatmaps WGCNA
2.0 years ago gianni.drm • 0
0
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1
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960
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struggling to create a heatmap
DESeq2 heatmaps
updated 2.0 years ago by ★ 4.6k • written 2.0 years ago by ▴ 10
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3
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1.6k
views
How can I draw a barplot of complexheatmap according 'Tumor Type'
heatma heatmaps ComplexHeatmap
updated 2.0 years ago by ▴ 40 • written 2.0 years ago by ▴ 10
2
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2
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929
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[DESeq2] There is no difference in expression in my heatmap
DESeq2 heatmaps
2.0 years ago Sooni ▴ 10
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5
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5.2k
views
How to identify top most variable genes from log2 normalized data?
supervised edgeR variance RNASeq heatmaps
updated 2.0 years ago by 52k • written 2.1 years ago by ▴ 10
2
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5
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2.2k
views
ComplexHeatmap - z-score color coding failed
heatmaps ComplexHeatmap
2.2 years ago Katharina • 0
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1
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3.5k
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Heatmap with result DESeq analysis
DESeq2 results Heatmaps plots
updated 2.3 years ago by 43k • written 2.3 years ago by • 0
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3
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1.8k
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Generate Heatmap from Gene Names after DESEQ2
DESeq2 DESEQ2 tximeta SummarizedExperiment heatmaps
updated 2.4 years ago by 68k • written 2.4 years ago by • 0
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1
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2.1k
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Complex Heatmap - correlation matrix - how to have exact same annotation with same colors for rows and columns?
R heatmaps ComplexHeatmap Heatma
updated 2.4 years ago by ▴ 290 • written 2.5 years ago by • 0
1
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1
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1.3k
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How fix lines of dendrogram that overlap in the column portion of a heatmap?
heat heatmaps
updated 2.6 years ago by 68k • written 2.6 years ago by • 0
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6.1k
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Scaling for p.heatmap
heatmaps pheatmap scaling
2.6 years ago Bhavana • 0
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3
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1.7k
views
Persisting error in making a heatmap
heatmaps gplots
2.6 years ago beslinail • 0
1
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1
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1.0k
views
Method for generating heatmap of overlapping DEGs?
heatm heatmaps
updated 2.8 years ago by 68k • written 2.8 years ago by • 0
0
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1
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1.4k
views
Help me do a gene enrichment analysis
DESeq2 topGO heatmaps
updated 3.4 years ago by ▴ 40 • written 3.4 years ago by • 0
0
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2
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2.0k
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PCA and heatmaps: most variable genes selection
DESeq2 ExpressionData heatmaps pca
3.6 years ago Clara ▴ 10
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1
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3.1k
views
Can you colour dendrogram branch clusters in pheatmap?
R heatmaps pheatmap
updated 3.9 years ago by ★ 4.0k • written 3.9 years ago by ▴ 10
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1
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1.1k
views
PCA rand heatmap of raw data
DESeq2 DiffSeq PrincipalComponent rlog heatmaps
updated 3.9 years ago by 43k • written 3.9 years ago by ▴ 30
4
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5
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DEseq2 results
heatmaps DEGs PCA
updated 3.9 years ago by ★ 4.0k • written 3.9 years ago by • 0
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897
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How to generate input file for Bioconductor package heatmaps
heatmaps input file
updated 5.9 years ago by 68k • written 5.9 years ago by ▴ 10
32 results • Page 1 of 1
Recent ...
Replies
Comment: error in ChAMP loading file by 81becky • 0
hi Giulia, it sounds like you're facing a frustating issue with your chAMP import. One common suggestion is to double-check your CSV fomat…
Answer: DESeq2 adujsted p-value cutoff seemingly not working by James W. MacDonald 68k
From `?results' ``` On p-values: By default, independent filtering is performed to select a set of genes for multiple tes…
Comment: Issue with assigning transcript IDs to reads when using summarizeOverlaps(mode = by SofieK • 0
Thank you, I will try this and see.
Comment: DiffBind - question on the use of filtered or unfiltered input data by deltaexploitss • 0
Data input is the adding of data into a computer. This can take place through an input device such as a keyboard. A user inputs data, which…
Comment: GenomeInfoDbData cannot install in R and warning had non-zero exit status by Renuka • 0
how you did it pls explain
Votes
A: Effect of lfcThreshold on p-value in DESeq2
Answer: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
What benchmark should I use for setting the EdgeR filterByExpr min.count parameter?
Answer: Issue with assigning transcript IDs to reads when using summarizeOverlaps(mode =
Comment: Unused arguments error without used arguments in GSVA?
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