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gwas
•
reset
0
votes
4
replies
1.1k
views
Which software can prune 5 Million SNPs?
LinkageDisequilibrium
SNP
gwas
GWASdata
ldblock
23 months ago • updated 22 months ago
Weiqiong
• 0
0
votes
0
replies
936
views
Job:
Postdoc position - Genetic epi/statistical genetics
GWAS
cancer
biomarkers
PRS
2.6 years ago
Sarah
• 0
0
votes
0
replies
958
views
Job:
Research Associate, statistical genetics & genomics, MRC Biostatistics Unit, University of Cambridge
molecularQTL
biostatistics
computationalbiology
GWAS
2.7 years ago
helene.ruffieux
• 0
0
votes
0
replies
881
views
Job:
Research Associate, computational/statistical genetics & genomics, MRC Biostatistics Unit, University of Cambridge
molecularQTL
computationalbiology
immunology
GWAS
biostatistics
2.9 years ago
helene.ruffieux
• 0
0
votes
1
reply
855
views
gwas power calculation for quantitative traits
power
GWAS
written 3.4 years ago by
rajya82
• 0
1
vote
2
replies
4.9k
views
Why are my p-values deflated (GWAS)?
gwas
genesis
p-value
q-q-plot
updated 4.0 years ago by
Anna
• 0 • written 5.2 years ago by
solanum
• 0
0
votes
0
replies
1.2k
views
Job:
Postdoc: BIOINFORMATICS FOR FUNCTIONAL GENOMICS AND POPULATION GENETICS OF CANCER
GWAS
lung cancer
functional genomics
eQTL
sequencing
Job
4.8 years ago
jiyeon.choi2
• 0
0
votes
3
replies
1.5k
views
GENESIS: ascertainment in GWAS
genesis
fitnullmodel
gwas
ascertainment
updated 5.5 years ago by
mconomos
▴ 70 • written 5.5 years ago by
ferranpauls10
• 0
0
votes
0
replies
897
views
Which R package has a test for a gene by environment interaction using imputed data and a quantitative phenotype?
GWAS
CGEN
gxe
6.0 years ago
pwjeffries
• 0
0
votes
1
reply
1.2k
views
Efficient resampling in GENESIS or another Bioconductor GWAS package to obtain empirical p-values?
GENESIS
GWAS
resampling
resample
statistics
6.0 years ago
naglemi
▴ 10
1
vote
1
reply
1.2k
views
Difference between AssocTestMM (GENESIS) and EMMAX? Why results are different?
GENESIS
GWAS
AssocTestMM
updated 6.2 years ago by
mconomos
▴ 70 • written 6.2 years ago by
naglemi
▴ 10
0
votes
1
reply
1.2k
views
Unable to build GDS with more than 255 scaffolds?
GENESIS
GWAS
GDS
updated 6.4 years ago by
zhengx
▴ 30 • written 6.4 years ago by
naglemi
▴ 10
0
votes
0
replies
1.0k
views
how to: enrichment (over representation) analysis of GWAS/QTL data distributed over a genome with GOSEQ
goseq
enrichment
GWAS
6.4 years ago
zhu
• 0
0
votes
3
replies
1.4k
views
GENESIS: assocTestMM error for lack of sex chromosome info (not relevant for this species)
GENESIS
assoctestmm
GWAS
updated 6.5 years ago by
mconomos
▴ 70 • written 6.5 years ago by
naglemi
▴ 10
3
votes
4
replies
1.7k
views
Why is assocTestMM running with only a fraction of SNPs in genotype data?
LMM
GWAS
GENESIS
assocTestMM
updated 6.5 years ago by
mconomos
▴ 70 • written 6.5 years ago by
naglemi
▴ 10
0
votes
1
reply
1.1k
views
GWAS: access Imputation probabilities: snpStats
gwas
snpstats
GWAS
Imputation
snpStats
6.6 years ago
GENOMIC_region
• 0
0
votes
0
replies
1.2k
views
Job:
BIOINFORMATICIAN I at Brigham and Women's Hospital, Boston, MA, USA
rna-seq
gwas
R
bioconductor
Job
7.6 years ago
IV
▴ 30
2
votes
0
replies
1.6k
views
Job:
Two year postdoc position at Trento, Laboratory of Neurogenomic Biomarkers, Italy
job
GWAS
genetics
genomics
neuro
Job
8.6 years ago
enridomenici
▴ 10
0
votes
0
replies
1.3k
views
News:
gwascat package updated: new features in devel branch
GWAS
genetic epidemiology
SNP
News
9.5 years ago
Vincent J. Carey, Jr.
6.7k
19 results • Page
1 of 1
Recent ...
Replies
Comment: Unused arguments error without used arguments in GSVA?
by
1sunmic2
• 0
It was due to the comma. Thank you!
Answer: Unused arguments error without used arguments in GSVA?
by
Axel Klenk
★ 1.1k
Hi, here is a good place to ask questions when encountering problems with GSVA. I cannot reproduce this behaviour with the current release…
Answer: Restricting differential binding analysis to only TSS-proximal regions
by
Aaron Lun
★ 28k
Seems reasonable to filter out windows outside of the TSS if you don't care about those events. IIRC the `discard` option will ignore any f…
Comment: Sample-specific methylation values using QSEA
by
User3088
• 0
Thanks Simon. I got the sample-specific methylation values by using '**samples=getSampleNames**' ``` result=makeTable(qs=prad_QSEAset, glm=…
Comment: input for singR function
by
iamin053
• 0
Hi Paria, I'm wondering if you were able to get an answer on this please. I would greatly appreciate any comments!
Votes
Answer: Unused arguments error without used arguments in GSVA?
Answer: Unused arguments error without used arguments in GSVA?
Answer: Unused arguments error without used arguments in GSVA?
Unused arguments error without used arguments in GSVA?
Answer: Is it always preferable to recount library sizes of DGEList object in edgeR afte
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