Showing : flowcytometry • reset
0
votes
0
replies
551
views
News: Online course - FLOW CYTOMETRY DATA ANALYSIS WITH R/BIOCONDUCTOR
Bioconductor FlowCytometryData FlowCytometry
11 months ago info ▴ 10
0
votes
0
replies
569
views
Merging 2 staining panels
FlowCytometry flowCore
21 months ago michaela.gregorova13 • 0
2
votes
1
reply
1.2k
views
How to modify a compensation matrix in an fcs file
flowCore FlowCytometry
2.0 years ago aguirre ▴ 20
0
votes
0
replies
705
views
How to fix Flow-Data autoplot heat map
FlowCytometry flowCore openCyto ggcyto
2.0 years ago Dennis.hinkel • 0
1
vote
1
reply
896
views
creating a NOT gate for gating out a single quadrant in a quadrant gate openCyto
FlowCytometry Opencyto
updated 2.1 years ago by ★ 4.0k • written 2.1 years ago by • 0
0
votes
0
replies
644
views
gate_quad_sequential as parent gate for downstream gating in opencyto CSV template
opencyto FlowCytometry
2.1 years ago Noël • 0
2
votes
9
replies
2.1k
views
Error when plotting flow cytometry data
FlowCytometry flowCore ggcyto
updated 2.2 years ago by ▴ 350 • written 2.2 years ago by • 0
0
votes
0
replies
715
views
Reducing/sampling number of FCS events
FlowCytometry flowCore
2.9 years ago markkelly1983 ▴ 20
0
votes
0
replies
851
views
Job: Bioconductor developer
FlowCytometry flowCore
3.0 years ago markkelly1983 ▴ 20
0
votes
1
reply
1.2k
views
[flowSOM] extracting data from tree
flowcytometry flowSOM flowSET flowFrame
5.6 years ago fabrizio.benedetti.82 • 0
0
votes
6
replies
2.4k
views
spillover::flowCore problem: Error in match(unstained, sampleNames(x))
flowcore spillover flowcytometry
updated 6.8 years ago by • 0 • written 8.7 years ago by • 0
0
votes
1
reply
1.2k
views
[flowCore] linearization of logarithmic data seems to be calculated wrong
flowcore flowcytometry
updated 6.8 years ago by ★ 1.3k • written 6.8 years ago by • 0
0
votes
1
reply
1.4k
views
Installation of "flowWorkspace" on Ubuntu fails
bioconductor R flowcytometry
7.8 years ago mo • 0
0
votes
2
replies
2.2k
views
Scaling fcs files with flowCore
flowCore flowcytometry
8.6 years ago Jiang, Mike ★ 1.3k
0
votes
1
reply
2.1k
views
FlowWorkspace and norm2Filter
flowcytometry opencyto flowworkspace flowcore
8.7 years ago Jiang, Mike ★ 1.3k
0
votes
1
reply
1.4k
views
FlowViz package question
flowviz flowcytometry
8.7 years ago Jiang, Mike ★ 1.3k
0
votes
1
reply
1.6k
views
read.flowSet error Error: vector::_M_range_check
software error read.flowset() read.fcs flowcore flowcytometry
8.8 years ago e.bestion • 0
1
vote
2
replies
1.4k
views
openCyto - samples with low cell counts
flowcytometry opencyto
8.8 years ago Jiang, Mike ★ 1.3k
0
votes
1
reply
1.4k
views
samples are reordered in read.flowSet
flowcore flowcytometry
9.3 years ago Jiang, Mike ★ 1.3k
0
votes
2
replies
2.1k
views
xyplot can't find channel (flowViz)
flowcore flowviz flowcytometry
updated 9.4 years ago by ★ 1.3k • written 9.4 years ago by • 0
0
votes
0
replies
1.5k
views
Re: FlowStats help
flowclust opencyto flowcytometry
9.7 years ago Jiang, Mike ★ 1.3k
1
vote
1
reply
1.7k
views
flowCore: using read.FCS with which.lines is not time efficient?
flowcore read.FCS flowcytometry
updated 9.9 years ago by ★ 1.3k • written 10.0 years ago by ▴ 10
4
votes
1
reply
1.9k
views
News: New Flow Cytometry Data Analysis Framework
flowcore flowcytometry opencyto new News
10.2 years ago Greg Finak ▴ 150
0
votes
0
replies
1.3k
views
FlowCore - reading in flowSets
FlowCytometry PROcess flowCore FlowCytometry PROcess flowCore
11.8 years ago Pieter Coussement ▴ 30
24 results • Page 1 of 1
Recent ...
Replies
Comment: Identical samples after deseq2 batch effect removal by Michael Love 42k
I'm adding my comment to the threaded section ... I don't have any suggestions here but whatever method you're using is not appropriate up…
Comment: ANOVA like approach of edgeR by Yunshun Chen ▴ 870
If you do it this way, the dispersion estimates would be much higher than they should (as the cell type difference is not accounted for in …
Comment: ANOVA like approach of edgeR by SamGG ▴ 350
Simply remove the cell type from the model. design <- model.matrix(~targets$Status)
Answer: ANOVA like approach of edgeR by Yunshun Chen ▴ 870
You could try the followings: > design <- model.matrix(~ 0 + group) > contrast <- makeContrasts(PvsL = 0.5*(L.pregnant + B.pregnan…
Answer: Identical samples after deseq2 batch effect removal by maripane • 0
Thanks Michael, so is there a way to work around this issue? Can I somehow make sure I can remove this batch effects without overcorrecti…
Votes
A: ANOVA-like test with edgeR
Answer: CleanUpRNAseq with a GTF that is missing mitochondria annotation data
Answer: CleanUpRNAseq with a GTF that is missing mitochondria annotation data
A: TopGO: How to retrieve the gene list related to a GO ID ?
A: Error in DESeqDataSet : some values in assay are not integers
Awards • All
Popular Question to Anna ▴ 20
Scholar to Haibo Liu ▴ 20
Popular Question to Talip ▴ 10
Popular Question to alexandre.blais ▴ 50
Popular Question to Fred Hutch (Recruiting) ▴ 40
Locations • All
France, 9 minutes ago
Germany, 22 minutes ago
United States, 29 minutes ago
Türkiye, 45 minutes ago
United Kingdom, 1 hour ago
Traffic: 790 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6