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Answer: Downloading Metagenomic Data with Higher Taxonomic Units
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I'm sorry I missed the first post! Yes, it is easy to agglomerate ranks in curatedMetagenomicData datasets. See the example in the vignette…
Comment: Differene between the Wald and LRT test for time-series gene expression data
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Denise
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This makes a lot of sense, thank you very much!
Comment: Downloading Metagenomic Data with Higher Taxonomic Units
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Hi! I'm facing the same problem.
Is there any easy way to output relative abundances of higher taxonomic units (up to kingdom), similar to…
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Just plot the samples with plotMDS().
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