Bioconductor Dmr

Showing : dmr • reset

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2.1k

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DMR Methylation R Gviz

updated 14 months ago by Robert Ivanek ▴ 750 • written 3.7 years ago by ltzhou • 0

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850

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edgeR DMR

updated 2.0 years ago by Michael Love 43k • written 2.0 years ago by Fiona • 0

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2.8k

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dmr MethylationArrayData DMRcatedata

updated 4.2 years ago by James W. MacDonald 67k • written 4.2 years ago by Julie • 0

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935

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Biseq Methylation DMP DMR RRBS

4.5 years ago i.s.castanho • 0

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909

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BiSeq testClusters error dmr

4.6 years ago akhaira • 0

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1.7k

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BiSeq DMR

updated 4.6 years ago by James W. MacDonald 67k • written 4.6 years ago by akhaira • 0

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1.0k

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ChAMP DMR

updated 4.7 years ago by Yuan Tian ▴ 290 • written 4.7 years ago by olive8306 • 0

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1.2k

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bumphunter DMR methylation minfi

5.0 years ago i.s.brorson • 0

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1.1k

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DMR bumphunter EPIC chip

5.0 years ago i.s.brorson • 0

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2.0k

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ChAMP DMR champ.DMR

6.3 years ago yuabrahamliu • 0

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866

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methylsig no replicates dmr

6.5 years ago nilaycan • 0

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1.7k

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bumphunter DMR doparallel multicore

updated 18 months ago by Alessandro • 0 • written 6.7 years ago by arce.domingo.1407 • 0

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1.7k

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dmrseq dmr dmrs bisulfite methylation

updated 6.9 years ago by keegan ▴ 60 • written 7.0 years ago by l.kremer • 0

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1.4k

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illumina methylationepic 450k limma minfi dmr analysis dmr

updated 7.9 years ago by Aaron Lun ★ 28k • written 7.9 years ago by Ellen O • 0

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1.8k

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dmrcate dmr analysis dmr

updated 8.0 years ago by Tim Peters ▴ 200 • written 8.0 years ago by alexandria.andrayas ▴ 10

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4.8k

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bumphunter DMR DMR analysis minfi bioconductor

updated 8.1 years ago by rafa ▴ 60 • written 8.1 years ago by chelsey.ju • 0

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4.2k

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bsseq dmr ttest pvalue

updated 9.0 years ago by James W. MacDonald 67k • written 9.0 years ago by enricoferrero ▴ 680

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1.9k

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methylation linear model dmr bsseq biseq

9.2 years ago enricoferrero ▴ 680

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2.8k

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dmr methylation deseq2 bsseq biseq

updated 9.3 years ago by Kasper Daniel Hansen ★ 6.5k • written 9.3 years ago by enricoferrero ▴ 680

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1.5k

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ChAMP minfi DMR dmr analysis lasso

9.3 years ago AST ▴ 60

20 results • Page 1 of 1

Recent ...

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Comment: Unused arguments error without used arguments in GSVA? by 1sunmic2 • 0

It was due to the comma. Thank you!

Answer: Unused arguments error without used arguments in GSVA? by Axel Klenk ★ 1.1k

Hi, here is a good place to ask questions when encountering problems with GSVA. I cannot reproduce this behaviour with the current release…

Answer: Restricting differential binding analysis to only TSS-proximal regions by Aaron Lun ★ 28k

Seems reasonable to filter out windows outside of the TSS if you don't care about those events. IIRC the `discard` option will ignore any f…

Comment: Sample-specific methylation values using QSEA by User3088 • 0

Thanks Simon. I got the sample-specific methylation values by using '**samples=getSampleNames**' ``` result=makeTable(qs=prad_QSEAset, glm=…

Comment: input for singR function by iamin053 • 0

Hi Paria, I'm wondering if you were able to get an answer on this please. I would greatly appreciate any comments!

Votes

Answer: Unused arguments error without used arguments in GSVA?

Unused arguments error without used arguments in GSVA?

Answer: Is it always preferable to recount library sizes of DGEList object in edgeR afte

Awards • All

Teacher to Axel Klenk ★ 1.1k