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developers bioc-devel

6.2 years ago Casper van Mourik • 0

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developers bioc-devel package development circular dependencies

updated 6.3 years ago by shepherl 4.1k • written 6.4 years ago by Tim Triche ★ 4.2k

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bioconductor developers bioc-devel News

6.8 years ago Alejandro Reyes ★ 1.9k

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git github developers

updated 7.1 years ago by nitesh.turaga ▴ 140 • written 7.1 years ago by wirth • 0

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github package updates developers package development

7.4 years ago rtraborn • 0

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flowDensity developers

updated 7.6 years ago by Martin Morgan 25k • written 7.6 years ago by mmalek • 0

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developers bioc-devel

updated 7.8 years ago by Martin Morgan 25k • written 7.8 years ago by mlbendall • 0

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github vignette test developers

updated 9.1 years ago by Dan Tenenbaum ★ 8.2k • written 9.1 years ago by anthonycolombo60 • 0

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r developers devel

updated 9.2 years ago by Martin Morgan 25k • written 9.2 years ago by MarcinKosiński • 0

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software bioc-devel developers R

updated 9.3 years ago by Dan Tenenbaum ★ 8.2k • written 9.3 years ago by MarcinKosiński • 0

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developers conference workshop News

updated 9.3 years ago by Laurent Gatto 1.6k • written 9.4 years ago by Mark Dunning ★ 1.1k

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bioconductor devel developers

updated 9.7 years ago by Martin Morgan 25k • written 9.7 years ago by andrew.j.skelton73 ▴ 370

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package bioconductor bioc-devel developers

9.7 years ago flying-sheep ▴ 10

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developers workshop conference meeting News

10.3 years ago Wolfgang Huber ★ 13k

14 results • Page 1 of 1

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Comment: GSVA on RNAseq data by Bob ▴ 10

Hi Robert, We were actually very interested in this problem in particular. It seems that using counts for gene sets with varying gene leng…

Comment: plyranges: find exact GRanges match keeping metadata columns by Michael Love 43k

But I will say if you are doing a lot of these, and require exact match, just making it a simple key -- eg `paste0(start,".",end)` -- seems…

Answer: Comparing Mock vs Infected in WT and Knockout Cells by Michael Love 43k

I recommend for questions about statistical analysis plan to meet with a local statistician or someone familiar with linear models in R. I …

Answer: In WGCNA, what networkType should be used in pickSoftThreshold for a Signed Nowi by ATpoint ★ 4.6k

WGCNA is no Bioconductor package. Consider biostars.org or bioinformatics Reddit, but if you do show a bit more effort please. People appre…

Answer: Error: lexical error: invalid char in json text (alevin-seurat) by ATpoint ★ 4.6k

Two things: 1) See https://bioconductor.org/packages/release/bioc/vignettes/tximport/inst/doc/tximport.html#Alevin -- Your `colon_file`…

Votes

A: how to extract Granges not overlapping with other ganges?

DESeq2 1.20.0 lfcshrink function

A: LIMMA on RT-PCR data

Answer: Efficiently working with HDF5-backed SingleCellExperiments

Efficiently working with HDF5-backed SingleCellExperiments

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