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bioc-devel
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2
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1.3k
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Segmentation Fault with development versions of R, Bioconductor, and DropletUtils when processing output of CellRanger 3.0.2
DropletUtils
Bioc-devel
5.1 years ago
Matthew Thornton
▴ 360
1
vote
5
replies
1.2k
views
[DEVELOPMENT] Trying to use development version of Bioconductor, needs R 3.6?...
developers
bioc-devel
5.5 years ago
Casper van Mourik
• 0
0
votes
2
replies
1.3k
views
Circular dependencies between data and software packages: how best to avoid
developers
bioc-devel
package development
circular dependencies
updated 5.6 years ago by
shepherl
3.9k • written 5.6 years ago by
Tim Triche
★ 4.2k
3
votes
1
reply
2.1k
views
News:
Latin American BioC Developers Workshop 2018
bioconductor
developers
bioc-devel
News
6.1 years ago
Alejandro Reyes
★ 1.9k
6
votes
3
replies
2.6k
views
How to solve "WARNING: Add non-empty \value" with roxygen tags
bioccheck
roxygen2
warning
bioc-devel
package development
updated 6.5 years ago by
Lluís Revilla Sancho
▴ 730 • written 6.5 years ago by
Paul Brennan
▴ 10
0
votes
0
replies
2.2k
views
Tutorial:
Using Subversion to update /devel branch of Bioconductor package
subversion
bioc-devel
package development
usedevel
Tutorial
6.8 years ago
Bohdan Khomtchouk
▴ 10
3
votes
2
replies
1.2k
views
Changing lead developer for existing package
developers
bioc-devel
updated 7.1 years ago by
Martin Morgan
25k • written 7.1 years ago by
mlbendall
• 0
2
votes
8
replies
3.6k
views
Unable to load/install rtracklayer (v1.33.2) on OS X (possibly SSL-related?)
rtracklayer
bioc-devel
ssl
openssl
updated 8.0 years ago by
Michael Lawrence
★ 11k • written 8.0 years ago by
Peter Hickey
▴ 740
1
vote
3
replies
1.6k
views
Are there any bioconductor github mirrors for data packages?
software
bioc-devel
developers
R
updated 8.5 years ago by
Dan Tenenbaum
★ 8.2k • written 8.5 years ago by
MarcinKosiński
• 0
3
votes
6
replies
2.1k
views
Bioconductor Docker Development container
docker
bioc-devel
updated 9.0 years ago by
Dan Tenenbaum
★ 8.2k • written 9.0 years ago by
Nathan Sheffield
▴ 10
5
votes
3
replies
1.6k
views
BiocCheck: REQUIRED: vignette sources in vignettes/ directory (for custom vignettebuilder)
package
bioconductor
bioc-devel
developers
9.0 years ago
flying-sheep
▴ 10
0
votes
2
replies
2.1k
views
Error reading vcf converted from bed file
readvcf
plink
file conversion
bed
bioc-devel
9.2 years ago
mjsduncan
• 0
0
votes
1
reply
2.0k
views
installation of GenomicRanges package in Rdevel fails
installation
bioc-devel
updated 9.6 years ago by
Martin Morgan
25k • written 9.6 years ago by
Tiphaine Martin
▴ 40
1
vote
1
reply
1.7k
views
Using hash packages with package:rtracklayer, GenomicRanges, Gviz, IRanges, biomaRt conflict
software error
bioc-devel
updated 9.6 years ago by
Martin Morgan
25k • written 9.6 years ago by
Tiphaine Martin
▴ 40
14 results • Page
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Comment: Ensembl plants at annotationHub?
by
Daniele
• 0
Dear Johannes, Would it be possible to create the EnsDb for Triticum aestivum (IWGSC)? Thank you very much, Daniele
Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools
by
BioinfGuru
▴ 30
Figured it out with ?eigencorplot, thanks Michael. I was trying to pass 10 PCs when I only had 8, and I was including metadata columns that…
Answer: DECIPHER::idTaxa - broken link to download GTDB r220 (modified) trainig set
by
makala
• 0
Thanks a lot!
Comment: DECIPHER::idTaxa - broken link to download GTDB r220 (modified) trainig set
by
Erik Wright
▴ 150
Thanks for notifying us of this broken link. It should be fixed on the Downloads page now. [1] [1]: http://www2.decipher.codes/Classificat…
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
by
Matthew Thornton
▴ 360
So it turns out that if the count and the size are the same in 'GOstats", the odds ratio is 'inf'. These are causing the issue. Thank you!!
Votes
Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
Rsubread counting peaks ATACseq
Comment: Can DESeq2 rlog normalized matrix reflects time course result directly?
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