Bioconductor Designmatrix

Showing : designmatrix • reset

votes

replies

1.4k

views

DESeq2 limma modelmatrix edgeR designmatrix

updated 2.6 years ago by Gordon Smyth 50k • written 2.6 years ago by rebecca.lea.johnston • 0

votes

replies

1.3k

views

limma microarray designmatrix

updated 7.8 years ago by Aaron Lun ★ 28k • written 7.8 years ago by nashchem • 0

votes

replies

1.2k

views

R designmatrix edgeR limma model.matrix

17 months ago Abdul ▴ 20

votes

replies

1.2k

views

Limma designMatrix

updated 5.8 years ago by Aaron Lun ★ 28k • written 5.8 years ago by Keifa ▴ 10

votes

replies

1.1k

views

designmatrix deseq2 DESeq2

updated 2.6 years ago by swbarnes2 ★ 1.4k • written 2.6 years ago by OST • 0

vote

replies

1.1k

views

designmatrix RNA-seq limma

updated 3.1 years ago by Gordon Smyth 50k • written 3.1 years ago by athief ▴ 20

votes

replies

1.0k

views

DESeq2 designmatrix edgeR limma tidybulk

updated 15 months ago by Michael Love 42k • written 15 months ago by aditya.m ▴ 10

votes

replies

954

views

MutlipleFactors DesignMatrix edgeR

3.3 years ago Debayan ▴ 20

votes

replies

913

views

edgeR pairedsamples designmatrix

3.3 years ago sfidemw • 0

votes

replies

854

views

edger r differentialanalysis rnaseq designmatrix

updated 5.0 years ago by Aaron Lun ★ 28k • written 5.0 years ago by Beginner ▴ 60

votes

replies

692

views

deseq2 miRNASeq designmatrix Batch

updated 4.1 years ago by Michael Love 42k • written 4.1 years ago by anshulmbi • 0

vote

replies

628

views

designmatrix DifferentialExpression edgeR RNAseq

3.2 years ago nageshprabhu.k ▴ 10

votes

replies

208

views

subsettingdata edgeR designmatrix

updated 28 days ago by Gordon Smyth 50k • written 28 days ago by prity6459 • 0

votes

185

views

limma designmatrix

updated 5 weeks ago by Gordon Smyth 50k • written 5 weeks ago by avery • 0

14 results • Page 1 of 1

Recent ...

Replies

Comment: Error while installing BiocManager::install("org.Vdahliae.eg.db") by Patadù ▴ 10

Hi @marcelramos Thanks for the clarification. Yes, I have installed `org.Vdahlaie.eg.db` using the code you and Guido suggested and now i…

Comment: European Bioconductor Conference 2023 planning by angelaesper43 • 0

@Maria Doyle[sexdolltech][1]Hosting EuroBioC provides an excellent opportunity to showcase Bioconductor and computational biology research …

Comment: Ensembl plants at annotationHub? by Johannes Rainer ★ 2.0k

Dear Daniele, for which Ensembl release would you need the data? the most recent is 112, but if you used a different version before it wou…

Comment: Ensembl plants at annotationHub? by Daniele • 0

Dear Johannes, Would it be possible to create the EnsDb for Triticum aestivum (IWGSC)? Thank you very much, Daniele

Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools by BioinfGuru ▴ 30

Figured it out with ?eigencorplot, thanks Michael. I was trying to pass 10 PCs when I only had 8, and I was including metadata columns that…

Votes

Answer: Error while installing BiocManager::install("org.Vdahliae.eg.db")

Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools

Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa

Rsubread counting peaks ATACseq

Awards • All