Bioconductor CopywriteR

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615

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CopywriteR CopyhelpeR

10 months ago fer_talavera • 0

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748

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CopywriteR

updated 10 months ago by fer_talavera • 0 • written 3.3 years ago by Joshua • 0

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1.2k

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copywriter cnv

updated 4.8 years ago by oscarkrijgsman ▴ 20 • written 4.8 years ago by Ram ▴ 220

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1.1k

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copywriter copynumber

updated 6.4 years ago by t.kuilman ▴ 170 • written 6.4 years ago by magdaaverte • 0

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2.5k

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s4vectors copywriter

updated 6.9 years ago by Michael Lawrence ★ 11k • written 6.9 years ago by TriS ▴ 200

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2.0k

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bioconductor biocparallel copywriter

updated 7.6 years ago by Martin Morgan 25k • written 7.6 years ago by genomic8328 ▴ 10

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1.3k

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copywriter

updated 7.9 years ago by t.kuilman ▴ 170 • written 7.9 years ago by filipzembol • 0

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1.9k

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copynumber cnvtools cnv copywriteR

updated 8.6 years ago by t.kuilman ▴ 170 • written 8.6 years ago by ahinsahr11 • 0

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1.6k

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CopywriteR

8.6 years ago Tom ▴ 10

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1.6k

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copywriter bam

updated 8.7 years ago by t.kuilman ▴ 170 • written 8.7 years ago by thestaroceanster • 0

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4.3k

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copywriter

updated 9.0 years ago by t.kuilman ▴ 170 • written 9.0 years ago by jcarter • 0

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2.7k

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copywriter dnacopy

updated 9.0 years ago by t.kuilman ▴ 170 • written 9.0 years ago by jcarter • 0

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1.5k

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copywriter

9.0 years ago MatthewGField ▴ 10

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2.9k

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CopywriteR copy number

updated 9.0 years ago by t.kuilman ▴ 170 • written 9.1 years ago by smcnulty • 0

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2.3k

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copywriter slurm openMPI

updated 9.0 years ago by t.kuilman ▴ 170 • written 9.0 years ago by smcnulty • 0

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1.6k

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copywriter bin size targeted sequencing

updated 9.0 years ago by t.kuilman ▴ 170 • written 9.0 years ago by sshung • 0

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1.5k

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CopywriteR

updated 9.1 years ago by t.kuilman ▴ 170 • written 9.1 years ago by Felix • 0

17 results • Page 1 of 1

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Answer: Plot title for PCA in DESeq2 by ATpoint ★ 4.7k

The function uses ggplot2, so you need `+ ggtitle('title')`. Please take a ggplot2 tutorial for details.

Comment: DESeq2 It is correct to use interaction term for patient variability? by Bradley • 0

I apologize, but I am still perplexed. I need to know the exact type of replication. Do we have many samples taken from the same tumor? You…

Comment: Differential variance analysis - can i use deseq2 by Michael Love 43k

VST is valid for working with expression data on a variance stabilized scale, so yes. There are many papers that have used VST and then com…

Answer: Use of limma R package with targeted proteomics for DE analysis by Gordon Smyth 52k

It is usual to analyse log normalized values from Olink in limma. Just a straight log transformation should be sufficient. We find that `tr…

Comment: WGCNA by pammelala304 • 0

Thank you for your time and effort. I am so grateful! Play game [block blast](https://blockblastpuzzle.io) free.

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Comment: Different annotation packages (org.Mm.eg.db, EnsDb.Mmusculus.v79, BiomaRt) retu

Answer: normalizatino of dna methylation EPIC data

Answer: Differential expression of protein coding ENSGs (Ensembl IDs) | When to biomaRt?

Suggesting changing the "reply-to" field to the mailing list address.

Answer: UniProt.ws query for single UniRef90 ID takes several minutes

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