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News:
EuroBioC2025: Abstract Submissions Open!
EuroBioC2025
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Conference
Bioconductor
15 days ago
Maria Doyle
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3
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959
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News:
EuroBioC2023 abstract submission is open!
presentation
EuroBioC2023
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updated 1 day ago by
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• 0 • written 2.0 years ago by
Maria Doyle
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0
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57
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GBCC2025 Abstract Submissions & Registration Now Open!
Community
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GBCC2025
Bioconductor
24 days ago
Maria Doyle
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76
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Announcing the GBCC2025 Logo Design Winner!
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GBCC2025
Bioconductor
5 weeks ago
Maria Doyle
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Bioconductor Course, Kenya 2025: Applications Open!
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Africa
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5 weeks ago
Maria Doyle
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News:
EuroBioC2023 abstract submission closing soon!
presentation
EuroBioc2023
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Bioconductor
written 22 months ago by
Maria Doyle
▴ 100
0
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0
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258
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News:
Announcing the GBCC2025 Logo Design Contest!
Conference
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Galaxy
GBCC2025
Bioconductor
4 months ago
Maria Doyle
▴ 100
0
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0
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274
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News:
Opportunity for Carpentries Instructors to Teach Bioconductor in Africa
Carpentries
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Bioconductor
5 months ago
Maria Doyle
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2
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609
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News:
Save the Date for EuroBioC2025 in Barcelona!
EuroBioC2025
Conference
Bioconductor
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5 months ago
Maria Doyle
▴ 100
0
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1
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938
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News:
Announcing GBCC 2025: The first-ever joint conference between Bioconductor and Galaxy!
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written 6 months ago by
Maria Doyle
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1
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463
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News:
BioCAsia 2024 Registration Now Open!
BioCAsia2024
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Bioconductor
6 months ago
Maria Doyle
▴ 100
0
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0
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330
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BioCAsia 2024 Abstract Deadline - August 26th
BioCAsia2024
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Bioconductor
6 months ago
Maria Doyle
▴ 100
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382
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News:
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EuroBioC2024
Bioconductor
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EuroBioC
6 months ago
Maria Doyle
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0
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0
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323
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EuroBioC2024 Flashtalks & Birds-of-a-Feather Sessions - submissions open!
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Bioconductor
EuroBioC2024
7 months ago
Maria Doyle
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0
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365
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News:
EuroBioC2024 Carpentries workshops Sep 2-3
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Workshop
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EuroBioC2024
7 months ago
Maria Doyle
▴ 100
0
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0
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355
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News:
BioC2024 in-person registration closes soon (July 10)
BioC2024
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8 months ago
Maria Doyle
▴ 100
0
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0
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337
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EuroBioC2024 Registration is Open!
Community
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Bioconductor
EuroBioC2024
9 months ago
Maria Doyle
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455
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BioC2024 Bioconductor Carpentries RNA-Seq Workshop July 22-23
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Bioconductor
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9 months ago
Maria Doyle
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10 months ago
Maria Doyle
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12 months ago
Maria Doyle
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0
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0
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712
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Bioconductor.org website new design - We Need Your Input!
Bioconductor
Community
Website
19 months ago
Maria Doyle
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News:
Reminder: BioC2023, Awards, TAB Deadline approaching - May 31st!
Bioconductor
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BioC2023
21 months ago
Maria Doyle
▴ 100
0
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0
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852
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News:
RNA-seq analysis with Bioconductor Carpentries workshop, Boston, Jul 31-Aug 1
Bioconductor
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22 months ago
Maria Doyle
▴ 100
0
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0
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776
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News:
Include your Bioconductor tutorial in Smörgåsbord 2023, May 22-26!
Training
Bioconductor
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Tutorial
22 months ago
Maria Doyle
▴ 100
1
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710
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Bioconductor joins GTN Smörgåsbord online training event, May 22-26, 2023!
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Bioconductor
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22 months ago
Maria Doyle
▴ 100
0
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1.6k
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News:
BioC2023 abstract submission is now open!
presentation
BioC2023
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Bioconductor
updated 6 months ago by
Ramon
• 0 • written 2.1 years ago by
Maria Doyle
▴ 100
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0
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667
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News:
Bioconductor call for events!
Bioconductor
events
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2.0 years ago
Maria Doyle
▴ 100
1
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1
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942
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News:
Join the Community Advisory Board -- upcoming elections -- deadline Today
Bioconductor
CAB
bioconductoroversight
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written 2.2 years ago by
shepherl
4.1k
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News:
Seeking members for BioC2023 organizing committee
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Bioconductor
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2.1 years ago
Maria Doyle
▴ 100
0
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0
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841
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Seeking Outreachy interns and project proposals
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Outreachy
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2.1 years ago
Maria Doyle
▴ 100
0
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0
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844
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translation
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2.7 years ago
kozo.nishida
• 0
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1.2k
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Job:
Bioconductor Community Manager
Community
Teaching
Bioconductor
2.8 years ago • updated 2.7 years ago
Matthew Ritchie
▴ 1000
0
votes
0
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878
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News:
Join the Bioconductor Community Advisory Board -- Deadline this Friday February 25
bioconductoroversight
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CAB
3.0 years ago
shepherl
4.1k
5
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0
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2.5k
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News:
Join the Bioconductor Community Advisory Board
bioconductoroversight
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CAB
3.1 years ago
shepherl
4.1k
3
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874
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News:
Call for Community Volunteered Package Reviewers
Community
SinglePackageBuilder
Reviews
Bioconductor
3.7 years ago • updated 3.6 years ago
shepherl
4.1k
0
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0
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999
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News:
Nominations for Bioconductor Technical Advisory Board are open
community
Bioconductor
3.8 years ago
Charlotte Soneson
▴ 170
0
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0
replies
1.1k
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News:
Community engagement, outreach, and diversity award
awards
bioc2021
recognition
community
Bioconductor
3.8 years ago
shepherl
4.1k
2
votes
0
replies
1.1k
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News:
New Bioconductor Community Advisory Board Members for 2021
bioconductoroversight
news
community
BiocVersion
3.9 years ago
Matthew Ritchie
▴ 1000
4
votes
1
reply
2.5k
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News:
Join the Bioconductor Community Advisory Board
bioconductoroversight
community
BiocVersion
news
updated 4.0 years ago by
aedin
• 0 • written 4.1 years ago by
Matthew Ritchie
▴ 1000
0
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1
reply
1.3k
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News:
Community engagement and outreach award
bioconductor
bioc2020
award
community
News
written 4.7 years ago by
shepherl
4.1k
2
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0
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1.1k
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News:
Bioconductor Community Advisory Board Members
news
bioconductor oversight
community
News
4.9 years ago
Matthew Ritchie
▴ 1000
7
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1
reply
1.7k
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News:
Bioconductor Community Advisory Board Nominees
news
community
bioconductor oversight
News
updated 5.1 years ago by
Sean Davis
21k • written 5.1 years ago by
Matthew Ritchie
▴ 1000
2
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1
reply
924
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News:
Results: Bioconductor Community Survey
community
feedback
News
5.1 years ago
Matthew Ritchie
▴ 1000
3
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0
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1.2k
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News:
Bioconductor Community Survey
feedback
community
News
5.4 years ago
Matthew Ritchie
▴ 1000
44 results • Page
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Answer: Differential expression of proteins using somascan data
by
James W. MacDonald
68k
Providing a bunch of code but not the output is not very helpful. Ideally you would just provide ``` nrow(design) ncol(protein_data_lo…
Comment: Surprising behavior for DEXseq dispersion estimate plot?
by
Elijah
• 0
Hi Snow, Thanks for your comment! I didn't do any normalization of the counts prior to the DEXseq pipeline - I've only been using the inte…
Comment: Using tximport for kallisto aligned TOIL data
by
Nicholas
• 0
Sorry, I misspoke. The data was from the TOIL project and was aligned using kallisto. It was accessed from the UCSC XENA browser. I updated…
Comment: Using tximport for kallisto aligned recount2 data
by
ATpoint
★ 4.7k
recount 2 does not use kallisto, does it? And recount does offer genelevel counts, so what's the point?
Comment: Seeking Advice on HTA 2.0 Microarray Data Processing with Oligo Package
by
Yao Lipu
• 0
Thank you for your help! Your explanation was very clear and really helped me solve my issue. I truly appreciate your time and effort!
Votes
Answer: Differential expression of proteins using somascan data
Answer: Surprising behavior for DEXseq dispersion estimate plot?
Answer: Handle zero effective gene length when tximport RSEM results
Handle zero effective gene length when tximport RSEM results
How to remove genes with 0 counts in tximport?
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