Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
colData
•
reset
0
votes
6
replies
329
views
Once again a "Model matrix not full rank"
DESeq2
design
coldata
updated 28 days ago by
swbarnes2
★ 1.4k • written 29 days ago by
arfranco
▴ 130
0
votes
2
replies
575
views
Heat Map
ColData
pheatmap
DESeq2
written 11 months ago by
dania.khalid
• 0
0
votes
1
reply
1.1k
views
Rename colData column
SingleCellExperiment
colData
rename
updated 15 months ago by
Basti
▴ 780 • written 15 months ago by
achoppe
▴ 10
1
vote
0
replies
590
views
Understanding ColData in BiSeq
BiSeq
Coldata
4.0 years ago
akhaira
• 0
2
votes
2
replies
1.5k
views
How to extract factor levels of coldata from deseq object?
deseq2
levels
factor
colData
updated 5.3 years ago by
Michael Love
42k • written 5.3 years ago by
ariel
▴ 20
4
votes
8
replies
42k
views
What is colData? How do I make one?
deseq2
coldata
updated 5.5 years ago by
swbarnes2
★ 1.4k • written 5.6 years ago by
mjrarcher
▴ 10
1
vote
7
replies
3.2k
views
Data from ##SAMPLE lines in VCF?
variantannotation
coldata
updated 5.7 years ago by
Valerie Obenchain
★ 6.8k • written 5.7 years ago by
lvclark
▴ 10
0
votes
6
replies
3.6k
views
DESeq2: handling NA values in colData
deseq2
coldata
NA
updated 5.8 years ago by
Michael Love
42k • written 5.8 years ago by
t.kuilman
▴ 170
0
votes
3
replies
1.5k
views
How to create the colData for a complex experiment
multiassayexperiment
colData
updated 6.5 years ago by
Levi Waldron
★ 1.1k • written 6.5 years ago by
Lluís Revilla Sancho
▴ 730
9 results • Page
1 of 1
Recent ...
Replies
Comment: How to compare subset of samples from VCF files
by
Gordon Smyth
50k
Welcome to Bioconductor support. Did you know that you can delete your old postings if they haven't received an answer yet? Instead of ap…
Comment: How to compare subset of samples from VCF files
by
Marco
• 0
Here's the vcf file as code block ``` ##fileformat=VCFv4.2 ##INFO=<ID=DP,Number=1,Type=Integer,Description="Approximate read depth"> ##FOR…
Comment: Gviz and custom database
by
James W. MacDonald
66k
The vignette for `Gviz` says you can use a `DNAStringSet`, generated using `Biostrings`. Have you tried that?
Comment: Gviz and custom database
by
luigi.faino
• 0
Dear, this is not what I need. I need to transform a fasta sequence in a genome track usable in Gviz. L
Answer: Gviz and custom database
by
James W. MacDonald
66k
https://bioconductor.org/packages/release/bioc/vignettes/txdbmaker/inst/doc/txdbmaker.html
Votes
Answer: makeExampleDESeqDataSet using pilot data
Answer: Checking/updating package versions
Answer: Why is longestConsecutive() depreceated in version 2.72 (BioC version 3.19)?
convert data frame of Entrez IDs to Gene Symbols
Answer: LRT, pairwise comparisons and p-value adjustment
Awards
• All
Popular Question
to
Gordon Smyth
50k
Popular Question
to
Marco Blanchette
▴ 30
Popular Question
to
Fred Hutch (Recruiting)
▴ 40
Scholar
to
James W. MacDonald
66k
Popular Question
to
Levi Waldron
★ 1.1k
Locations
• All
WEHI, Melbourne, Australia,
1 minute ago
San Diego,
11 minutes ago
United States,
1 hour ago
The city by the bay,
2 hours ago
United States,
2 hours ago
Traffic: 351 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6