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bioccheck
•
reset
7
votes
2
replies
1.2k
views
Format roxgen comment (alternative to formatR)
BiocCheck
written 2.7 years ago by
ZheFrench
▴ 60
5
votes
2
replies
999
views
Coding Style for BioC Package submissions: camelCaps or snake_case?
BiocCheck
style
updated 2.6 years ago by
Steve Lianoglou
★ 13k • written 2.6 years ago by
pouryany
• 0
0
votes
2
replies
962
views
BiocCheck object initialization - NOTE
BiocC
BiocCheck
3.1 years ago • updated 3.0 years ago
ullrich
▴ 20
0
votes
2
replies
737
views
Error running ExperimentHubData::makeExperimentHubMetadata on Windows 10
BiocCheck
updated 3.2 years ago by
shepherl
3.9k • written 3.2 years ago by
wewolski
▴ 10
0
votes
2
replies
1.5k
views
Installation fails only in Linux... How to debug "ERROR: lazy loading failed for package XXX"?
BiocCheck
Install
martini
3.5 years ago
Hector
• 0
0
votes
1
reply
877
views
BiocCheck gives 'Error in readLines(file, skipNul = TRUE) : cannot open the connection'
BiocCheck
updated 4.8 years ago by
James W. MacDonald
66k • written 4.8 years ago by
zhezhenwang
• 0
1
vote
2
replies
1.9k
views
Dealing With Package Sizes Greater than 5 MB
data
package submission
BiocCheck
4.9 years ago
j.flesch
▴ 10
0
votes
12
replies
1.2k
views
no vignettes directory error during BiocCheck checking [SOLVED]
BiocCheck
5.0 years ago
waterincan
• 0
0
votes
2
replies
944
views
BiocCheck package size
BiocCheck
updated 5.1 years ago by
Hervé Pagès
16k • written 5.1 years ago by
zhang.jianhai
▴ 10
4
votes
6
replies
4.4k
views
WARNING: remove set.seed usage in R code
R
bioccheck
updated 6.0 years ago by
shepherl
3.9k • written 6.0 years ago by
xyluo1991
• 0
2
votes
5
replies
2.0k
views
How do you run BiocCheck from a continuous integration service?
continuous-integration
testing
bioccheck
updated 6.0 years ago by
Marcel Ramos
700 • written 8.1 years ago by
richierocks
▴ 40
0
votes
1
reply
1.3k
views
Advice on finding: "1 lines (0%) are > 80 characters long" - my last BiocCheck NOTE
bioccheck
package development
6.6 years ago
Paul Brennan
▴ 10
6
votes
3
replies
2.6k
views
How to solve "WARNING: Add non-empty \value" with roxygen tags
bioccheck
roxygen2
warning
bioc-devel
package development
updated 6.6 years ago by
Lluís Revilla Sancho
▴ 730 • written 6.6 years ago by
Paul Brennan
▴ 10
1
vote
2
replies
1.3k
views
BiocCheck path escape issue
bioccheck
bug
7.1 years ago
Michael Steinbaugh
▴ 90
0
votes
2
replies
898
views
NOT SUPPORTED... in BioC check report
bioccheck
build/check error
updated 7.1 years ago by
Martin Morgan
25k • written 7.1 years ago by
ihnatova
• 0
2
votes
10
replies
2.4k
views
BiocCheck incorrectly reports I'm not registered on this site
bioccheck
updated 20 months ago by
Marek Gierlinski
▴ 30 • written 7.6 years ago by
david.a.quigley
• 0
0
votes
1
reply
1.3k
views
built vignette using knitr
knitr
vignettes
built
bioccheck
no-ASCII
8.2 years ago
kmezhoud
▴ 10
1
vote
3
replies
1.8k
views
Man pages with runnable examples calculation
BiocCheck
updated 8.3 years ago by
Dan Tenenbaum
★ 8.2k • written 8.3 years ago by
liz.ingsimmons
▴ 140
18 results • Page
1 of 1
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Comment: Odd behavior of Rsubread::featureCounts when setting `nonOverlap = 0`
by
isaac.vock
• 0
Thank you for looking into this and for your explanation! As a follow-up, would it be possible in future releases of featureCounts to pro…
Comment: error loading collectTRI regulon
by
silvaesilva.da
• 0
Fantastic. Thank you very much. Everything has been sorted out
Answer: DESeq2 returns results for group with just one replicate
by
James W. MacDonald
66k
There is no problem having only one replicate per group, so long as you have replicates for other groups. The degrees of freedom are based …
Answer: Limma model.matrix design with batch effect and different life stages proportion
by
Masongeorge
• 0
Thanks for this post. i found it helpful for my own issue that was occurring on the backend of this page.
Comment: error loading collectTRI regulon
by
deeenes
▴ 50
I fixed the original, Ensembl HTTP 403 error only now, [see here][1]. If you've seen it gone earlier today, only shows that this error appe…
Votes
Answer: Odd behavior of Rsubread::featureCounts when setting `nonOverlap = 0`
Answer: DESeq2 returns results for group with just one replicate
Answer: DESeq2 returns results for group with just one replicate
Comment: error loading collectTRI regulon
A: Scaling option in fastMNN
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