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bioccheck
•
reset
7
votes
2
replies
1.2k
views
Format roxgen comment (alternative to formatR)
BiocCheck
written 2.8 years ago by
ZheFrench
▴ 60
5
votes
2
replies
1.0k
views
Coding Style for BioC Package submissions: camelCaps or snake_case?
BiocCheck
style
updated 2.6 years ago by
Steve Lianoglou
★ 13k • written 2.6 years ago by
pouryany
• 0
0
votes
2
replies
980
views
BiocCheck object initialization - NOTE
BiocC
BiocCheck
3.1 years ago
ullrich
▴ 20
0
votes
2
replies
750
views
Error running ExperimentHubData::makeExperimentHubMetadata on Windows 10
BiocCheck
updated 3.2 years ago by
shepherl
3.9k • written 3.2 years ago by
wewolski
▴ 10
0
votes
2
replies
1.5k
views
Installation fails only in Linux... How to debug "ERROR: lazy loading failed for package XXX"?
BiocCheck
Install
martini
3.6 years ago
Hector
• 0
0
votes
1
reply
891
views
BiocCheck gives 'Error in readLines(file, skipNul = TRUE) : cannot open the connection'
BiocCheck
updated 4.9 years ago by
James W. MacDonald
66k • written 4.9 years ago by
zhezhenwang
• 0
1
vote
2
replies
1.9k
views
Dealing With Package Sizes Greater than 5 MB
data
package submission
BiocCheck
4.9 years ago
j.flesch
▴ 10
0
votes
12
replies
1.2k
views
no vignettes directory error during BiocCheck checking [SOLVED]
BiocCheck
5.1 years ago
waterincan
• 0
0
votes
2
replies
955
views
BiocCheck package size
BiocCheck
updated 5.2 years ago by
Hervé Pagès
16k • written 5.2 years ago by
zhang.jianhai
▴ 10
4
votes
6
replies
4.4k
views
WARNING: remove set.seed usage in R code
R
bioccheck
updated 6.0 years ago by
shepherl
3.9k • written 6.0 years ago by
xyluo1991
• 0
2
votes
5
replies
2.0k
views
How do you run BiocCheck from a continuous integration service?
continuous-integration
testing
bioccheck
updated 6.0 years ago by
Marcel Ramos
700 • written 8.1 years ago by
richierocks
▴ 40
0
votes
1
reply
1.4k
views
Advice on finding: "1 lines (0%) are > 80 characters long" - my last BiocCheck NOTE
bioccheck
package development
6.7 years ago
Paul Brennan
▴ 10
6
votes
3
replies
2.7k
views
How to solve "WARNING: Add non-empty \value" with roxygen tags
bioccheck
roxygen2
warning
bioc-devel
package development
updated 6.7 years ago by
Lluís Revilla Sancho
▴ 730 • written 6.7 years ago by
Paul Brennan
▴ 10
1
vote
2
replies
1.3k
views
BiocCheck path escape issue
bioccheck
bug
7.2 years ago
Michael Steinbaugh
▴ 90
0
votes
2
replies
905
views
NOT SUPPORTED... in BioC check report
bioccheck
build/check error
updated 7.2 years ago by
Martin Morgan
25k • written 7.2 years ago by
ihnatova
• 0
2
votes
10
replies
2.5k
views
BiocCheck incorrectly reports I'm not registered on this site
bioccheck
updated 21 months ago by
Marek Gierlinski
▴ 30 • written 7.7 years ago by
david.a.quigley
• 0
0
votes
1
reply
1.3k
views
built vignette using knitr
knitr
vignettes
built
bioccheck
no-ASCII
8.2 years ago
kmezhoud
▴ 10
1
vote
3
replies
1.8k
views
Man pages with runnable examples calculation
BiocCheck
updated 8.4 years ago by
Dan Tenenbaum
★ 8.2k • written 8.4 years ago by
liz.ingsimmons
▴ 140
18 results • Page
1 of 1
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Replies
Comment: Mapping Between GenBank ID's and Uniprot
by
James W. MacDonald
66k
Also, ``` > result <- mapUniProt( from = "EMBL-GenBank-DDBJ_CDS", to = "UniProtKB", query = c("ACF95883.1") ) > result From…
Comment: Mapping Between GenBank ID's and Uniprot
by
James W. MacDonald
66k
Ugh, here's the link https://www.uniprot.org/id-mapping/uniprotkb/dd08aa16774d98ef087dc3bd708582012bba49e2/overview?fields=accession%2Cre…
Answer: Mapping Between GenBank ID's and Uniprot
by
James W. MacDonald
66k
The input should be 'EMBL-GenBank-DDBJ_CDS", as that is a GenBank ID.
Answer: XCMS2 of orbitrap data
by
Elodie
• 0
Hi, I have the same question, I have acquired MS2 data with PRM analysis and inclusion lists of several ions. I have a list of product ion…
Answer: unreal negative log2fc values
by
ATpoint
★ 4.2k
I don't see why this is unrealistic. A logFC of -10 is about -1000 on normal scale. The rough difference between the mean of these counts p…
Votes
Answer: EPIC array hg38 annotation?
Answer: Why does DESeq2 give negative log2 fold change in treatment vs control for some
Comment: Error while installing BiocManager::install("org.Vdahliae.eg.db")
Comment: Ranking the GSEA Results
Error in `$<-.data.frame`(`*tmp*`, "dispersion", value = NA)
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