Bioconductor Bioccheck

Showing : bioccheck • reset

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1.7k

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BiocCheck

written 3.5 years ago by ZheFrench ▴ 60

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1.3k

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BiocCheck style

updated 3.4 years ago by Steve Lianoglou ★ 13k • written 3.4 years ago by pouryany • 0

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BiocC BiocCheck

3.9 years ago • updated 3.8 years ago ullrich ▴ 20

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925

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BiocCheck

updated 4.0 years ago by shepherl 4.1k • written 4.0 years ago by wewolski ▴ 10

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BiocCheck Install martini

4.3 years ago Hector • 0

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1.1k

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BiocCheck

updated 5.6 years ago by James W. MacDonald 68k • written 5.6 years ago by zhezhenwang • 0

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data package submission BiocCheck

5.7 years ago j.flesch ▴ 10

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1.5k

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BiocCheck

5.8 years ago waterincan • 0

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1.2k

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BiocCheck

updated 5.9 years ago by Hervé Pagès 16k • written 5.9 years ago by zhang.jianhai ▴ 10

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5.4k

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R bioccheck

updated 6.8 years ago by shepherl 4.1k • written 6.8 years ago by xyluo1991 • 0

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continuous-integration testing bioccheck

updated 6.8 years ago by Marcel Ramos 700 • written 8.9 years ago by richierocks ▴ 40

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bioccheck package development

7.4 years ago Paul Brennan ▴ 10

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3.1k

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bioccheck roxygen2 warning bioc-devel package development

updated 7.4 years ago by Lluís Revilla Sancho ▴ 760 • written 7.4 years ago by Paul Brennan ▴ 10

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bioccheck bug

8.0 years ago • updated 7.9 years ago Michael Steinbaugh ▴ 90

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1.1k

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bioccheck build/check error

updated 8.0 years ago by Martin Morgan 25k • written 8.0 years ago by ihnatova • 0

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bioccheck

updated 2.5 years ago by Marek Gierlinski ▴ 30 • written 8.4 years ago by david.a.quigley ▴ 10

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knitr vignettes built bioccheck no-ASCII

9.0 years ago kmezhoud ▴ 10

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BiocCheck

updated 9.1 years ago by Dan Tenenbaum ★ 8.2k • written 9.1 years ago by liz.ingsimmons ▴ 140

18 results • Page 1 of 1

Recent ...

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Comment: DESeq2 - human data, weird results, troubleshooting by bd2000 ▴ 30

I didn't include all of my code the post would be too long. Here's a link to my GitHub if anyone would like to see the full code: [Full Rst…

Answer: DESeq: Gene is not flagged as differentially expressed despite count data showin by James W. MacDonald 68k

The simple answer is that the within-group variability is much higher for the first gene as compared to the second. The Wald statistic is j…

Comment: DESeq: Gene is not flagged as differentially expressed despite count data showin by ATpoint ★ 4.8k

> since there doesn't seem to be as much count variability, No? Your CD45 samples range on normalized scale from 2 to 3255. That's 3 orde…

Comment: Ensembl site unresponsive via biomaRt by darylruiz6545 • 0

Thank you so much for sharing the link.

Comment: compute_fasta_digest does not match Salmon index hash by Alex • 0

I use the `fastaDigest` tool from [COMBINE-lab/fastaDigest](https://github.com/COMBINE-lab/FastaDigest/), which has the function `compute_f…

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Answer: DESeq: Gene is not flagged as differentially expressed despite count data showin

Two EPIC Methylation Array Analysis Questions

How to get DMR for Infinium methylation EPIC v2

A: GEOquery Fails to Download Series Matrix File

Comment: Gene IDs conversion between Ensembl and NCBI nomenclature for non-model species

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