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News: Opportunity for Carpentries Instructors to Teach Bioconductor in Africa
Carpentries Community Teaching Bioconductor
5 months ago Maria Doyle ▴ 100
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News: Bioconductor Carpentries instructor training
teaching Carpentries
2.4 years ago Maria Doyle ▴ 100
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News: Bioconductor teaching week
teaching Carpentries
written 2.6 years ago by 1.6k
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Job: Lecturer in Statistics - School of Mathematics and Statistics - University of St Andrews
computational teaching statistics research
2.6 years ago Andy Lynch ▴ 120
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Job: Bioconductor Community Manager
Community Teaching Bioconductor
2.8 years ago • updated 2.7 years ago Matthew Ritchie ▴ 1000
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Job: Research software engineer at the de Duve Institute, UCLouvain (Brussels, Belgium)
software engineer job teaching bioconductor Job
6.4 years ago Laurent Gatto 1.6k
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EdgeR: Explaning dispersion types to newbies
edger dispersion estimatedispersions visualization teaching
updated 6.7 years ago by ★ 28k • written 6.7 years ago by ▴ 20
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News: New Master of Science in Quantitative and Computational Biology at University of Trento, Italy
computational biology bioinformatics teaching master News
updated 8.7 years ago by • 0 • written 8.7 years ago by ▴ 10
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News: Bioconductor-related papers -- special F1000Research collection for Bioc2016
publication workflows benchmark teaching News
updated 8.9 years ago by ▴ 10 • written 9.0 years ago by ★ 13k
9 results • Page 1 of 1
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Comment: sesameDataCache is not work properly on my system by Samreen • 0
Any luck with this? I have tried all of the above and it still doesn't work. This is my session info and I'm on a cluster computing environ…
Answer: Using tximport for kallisto aligned TOIL data by James W. MacDonald 68k
If you just have the transcript data, you probably don't need (and maybe cannot use) `tximport`. Instead you could just do the naive thing …
Answer: Reading gene expression data in GPR format and converting it to xlsx format by James W. MacDonald 68k
Setting aside the inadvisability of putting these data into Excel (and I should point out that these data are not single-cell, but instead …
Comment: concentration tables suitable as input for new packages? by wilkinson • 0
I am grateful for your response. Software such as "Spectra" may parse MS-data to generate tables of concentrations, for instance. But inste…
Comment: Removing UTR from GTF for gene quantification by ATpoint ★ 4.7k
Consider asking at biostars or bioinformatics reddit, since this is not directly related to a Bioconductor problem. Anyway, a couple of th…
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Answer: Differential expression of proteins using somascan data
Answer: Surprising behavior for DEXseq dispersion estimate plot?
Answer: Handle zero effective gene length when tximport RSEM results
Handle zero effective gene length when tximport RSEM results
How to remove genes with 0 counts in tximport?
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