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Virangika
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Clarification of what DESeq2::estimateSizeFactors controlGenes does and when it should *not* be used
updated 2.0 years ago by
ATpoint
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written 2.0 years ago by
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updated 9 months ago by
maria.soler
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mb1996
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updated 16 months ago by
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written 3.9 years ago by
robert.chen
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Answer: DESeq2 adujsted p-value cutoff seemingly not working
by
James W. MacDonald
68k
From `?results'
```
On p-values:
By default, independent filtering is performed to select a set of
genes for multiple tes…
Comment: Issue with assigning transcript IDs to reads when using summarizeOverlaps(mode =
by
SofieK
•
0
Thank you, I will try this and see.
Comment: DiffBind - question on the use of filtered or unfiltered input data
by
deltaexploitss
•
0
Data input is the adding of data into a computer. This can take place through an input device such as a keyboard. A user inputs data, which…
Comment: GenomeInfoDbData cannot install in R and warning had non-zero exit status
by
Renuka
•
0
how you did it pls explain
Answer: Issue with assigning transcript IDs to reads when using summarizeOverlaps(mode =
by
James W. MacDonald
68k
If I understand correctly, you want to assess differential transcript abundances. If so, there are a couple of ways you can do that. One wa…
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