Showing : Software • reset
1
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0
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636
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News: Bioconductor 3.20 is Released!
Bioconductor Release Software
3 months ago shepherl 4.1k
0
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11
replies
1.8k
views
News: List of Deprecated Packages for Bioc3.19
Release Devel ExperimentData Software
11 months ago • updated 4 months ago shepherl 4.1k
3
votes
3
replies
1.4k
views
News: Bioconductor 3.20 Release Schedule
software release Release
updated 4 months ago by 52k • written 5 months ago by 4.1k
0
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1
reply
1.2k
views
Job: Research software engineer at UPF Barcelona
JobPosting Devel GSVA Software
written 2.2 years ago by ★ 3.4k
4
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0
replies
992
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News: Bioconductor 3.19 is Released!
Release Bioconductor Packages Software
9 months ago shepherl 4.1k
0
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1
reply
1.1k
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News: Bioconductor 3.19 Release Schedule
Release release Software
11 months ago shepherl 4.1k
5
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1
reply
1.4k
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News: Bioconductor 3.18 is Released!
Packages Bioconductor Release Software
written 16 months ago by 4.1k
2
votes
1
reply
1.8k
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Software Compatibility Issue Between phyloseq and lme4 Packages
phyloseq microbiome Software
updated 17 months ago by ★ 4.7k • written 17 months ago by ▴ 10
0
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0
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1.2k
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News: Bioconductor 3.18 Release Schedule
Release Software release
17 months ago shepherl 4.1k
0
votes
1
reply
632
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Generate false reads for testing
mgu74bv2cdf Software Alignment
updated 20 months ago by 68k • written 20 months ago by • 0
1
vote
8
replies
1.8k
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News: Final List of Deprecated Package Bioc 3.9
deprecation release software experimentData News
written 5.9 years ago by 4.1k
0
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0
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960
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News: Bioconductor 3.17 is Released!
Packages Release Bioconductor Software
22 months ago shepherl 4.1k
0
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0
replies
850
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News: Bioconductor 3.17 Release Schedule
Softwar Release Bioconductor release Software
23 months ago shepherl 4.1k
3
votes
6
replies
1.5k
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News: Bioconductor will rename the default branch on `git.bioconductor.org` to `devel`
Software Bioconductor Devel devel
updated 23 months ago by • 0 • written 24 months ago by 4.1k
1
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0
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1.1k
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News: Bioconductor 3.16 is Released!
Release Packages Bioconductor Software
2.3 years ago shepherl 4.1k
0
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0
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966
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News: New Package Submission Deadline Tomorrow for Bioconductor 3.16
Release Devel Bioconductor Software
2.4 years ago shepherl 4.1k
8
votes
0
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1.2k
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News: Bioconductor 3.15 is Released!
Software Release Packages Bioconductor
2.8 years ago shepherl 4.1k
0
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0
replies
839
views
News: New Package Submission Deadline Tomorrow for Bioconductor 3.15
Release Software Bioconductor Devel
2.9 years ago shepherl 4.1k
0
votes
5
replies
1.7k
views
News: Final List of Deprecated Packages for Bioc3.14
ExperimentData Deprecation Software Release Workflow
3.4 years ago • updated 2.8 years ago shepherl 4.1k
8
votes
0
replies
1.2k
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News: Bioconductor 3.14 is Released!
release Packages Software Release Bioconductor
3.3 years ago shepherl 4.1k
0
votes
0
replies
1.2k
views
Job: Hiring Bioinformaticians, Data Engineers, & Computer Scientists @ Flagship Labs 77
data immunology software vaccinology
3.5 years ago Daniel • 0
5
votes
0
replies
1.2k
views
News: Bioconductor 3.13 is Released!
Release Bioconductor Packages Software
3.8 years ago • updated 3.7 years ago shepherl 4.1k
2
votes
2
replies
1.8k
views
News: Final List of Deprecated Packages for Bioc3.13
Workflow Software ExperimentData Deprecation
4.2 years ago • updated 3.8 years ago shepherl 4.1k
4
votes
0
replies
1.2k
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News: Bioconductor 3.12 is Released!
Software release Bioconductor Packages Release
4.3 years ago shepherl 4.1k
1
vote
2
replies
1.7k
views
News: Final List of Deprecated Packages for Bioc3.12
annotation software experimentdata deprecated News
4.4 years ago • updated 4.3 years ago shepherl 4.1k
0
votes
0
replies
1.3k
views
Job: R programmer position in genetic epidemiology/bioconductor
genetics genomics software Job
4.4 years ago Vincent J. Carey, Jr. 6.7k
2
votes
4
replies
1.5k
views
Bioconductor package development
package R software development
updated 4.4 years ago by 25k • written 4.4 years ago by • 0
3
votes
0
replies
1.7k
views
News: List of Deprecated Packages for Bioc3.12
annotation software experiment data deprecated News
4.5 years ago • updated 4.4 years ago shepherl 4.1k
0
votes
2
replies
1.0k
views
What is Software, Annotationdata, Experimentdata and workflow category?
Software annotation experiment workflow
updated 4.5 years ago by 4.1k • written 4.5 years ago by • 0
0
votes
0
replies
1.2k
views
News: List of Deprecated Packages for Bioc3.12
deprecated experiment data software annotation News
4.7 years ago shepherl 4.1k
0
votes
2
replies
1.0k
views
Problem in dowloading "TxDb.Hsapiens.UCSC.hg38.knownGene"
annotation software TxDb
updated 4.7 years ago by 68k • written 4.7 years ago by • 0
0
votes
3
replies
1.3k
views
News: Final List of Deprecated Packages for Bioc3.11
software annotation experiment data deprecated News
updated 4.8 years ago by ▴ 160 • written 4.9 years ago by 4.1k
4
votes
0
replies
1.0k
views
News: Bioconductor 3.11 is Released!
software bioconductor release packages News
4.8 years ago shepherl 4.1k
0
votes
0
replies
1.1k
views
News: List of Deprecated Packages Bioc 3.11
annotation experimentdata software release deprecation News
5.0 years ago shepherl 4.1k
0
votes
1
reply
1.1k
views
News: List of Deprecated Packages Bioc 3.11
annotation experimentdata software release deprecation News
5.1 years ago shepherl 4.1k
1
vote
1
reply
1.3k
views
How to use ENCprime via coRdon with a custom background sequence set?
software codon usage bias dna
updated 5.2 years ago by ▴ 10 • written 5.2 years ago by ▴ 40
0
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0
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1.1k
views
News: List of Deprecated Packages Bioc 3.11
annotation experimentdata software release deprecation News
5.3 years ago shepherl 4.1k
0
votes
2
replies
2.1k
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News: Final List of Deprecated Packages for Bioc3.10
annotation experimentdata deprecation release software News
5.4 years ago • updated 5.3 years ago shepherl 4.1k
2
votes
2
replies
1.3k
views
News: Bioconductor Devel 3.11 Notification
software bioconductor packages reports News
5.3 years ago shepherl 4.1k
6
votes
0
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1.1k
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News: Bioconductor 3.10 is released!!
release software packages bioconductor News
5.3 years ago shepherl 4.1k
0
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0
replies
1.1k
views
News: List of Deprecated Packages Bioc 3.10
annotation experimentdata software release deprecation News
5.5 years ago • updated 5.4 years ago shepherl 4.1k
2
votes
0
replies
2.6k
views
Job: Bioconductor infrastructure for the integration of genomics, transcriptomics and proteomics data
proteomics genomics transcriptomics software Job
5.4 years ago Laurent Gatto 1.6k
0
votes
1
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1.2k
views
News: List of Deprecated Packages Bioc 3.10
annotation experimentdata software deprecation release News
5.6 years ago • updated 5.5 years ago shepherl 4.1k
0
votes
0
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958
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Job: Software Developer - BC Cancer Research Center, Vancouver BC
software bioinformatics sequecing Job
5.7 years ago jmaanaki • 0
0
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3
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1.3k
views
News: List of Deprecated Packages Bioc 3.10
annotation experimentdata software release deprecation News
5.7 years ago shepherl 4.1k
0
votes
1
reply
1.1k
views
News: Initial List of Deprecated Packages Bioc 3.10
software experimentdata release deprecation annotation News
5.8 years ago shepherl 4.1k
0
votes
1
reply
1.5k
views
News: List of Deprecated Package Bioc 3.9
deprecate release devel software experimentdata News
6.0 years ago shepherl 4.1k
0
votes
1
reply
1.4k
views
Meta_analysis of different platforms of microarray data
microarray meta analysis cancer Software R
updated 6.1 years ago by 68k • written 6.1 years ago by • 0
0
votes
1
reply
1.3k
views
News: List of Deprecated Package Bioc 3.9
deprecate release software devel News
6.1 years ago shepherl 4.1k
0
votes
0
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1.3k
views
News: DEADLINE: All packages to pass R CMD build and R CMD check
release software experimentdata workflows News
6.8 years ago shepherl 4.1k
50 results • Page 1 of 1
Recent ...
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Comment: Differential variance analysis - can i use deseq2 by Michael Love 43k
VST is valid for working with expression data on a variance stabilized scale, so yes. There are many papers that have used VST and then com…
Answer: Use of limma R package with targeted proteomics for DE analysis by Gordon Smyth 52k
It is usual to analyse log normalized values from Olink in limma. Just a straight log transformation should be sufficient. We find that `tr…
Comment: WGCNA by pammelala304 • 0
Thank you for your time and effort. I am so grateful! Play game [block blast](https://blockblastpuzzle.io) free.
Comment: Does anyone have the command to download all of the core_nt using blast_db_get() by Matthew Thornton ▴ 380
Ok. So I guess the core_nt is over 300Gb compressed. I can do it, but maybe it is better to just use ncbi-tools over the internet and just…
Comment: normalizatino of dna methylation EPIC data by user_bioinfo • 0
yes actually that's why I did, and its all good! thank you for your response
Votes
Comment: Different annotation packages (org.Mm.eg.db, EnsDb.Mmusculus.v79, BiomaRt) retu
Answer: normalizatino of dna methylation EPIC data
Answer: Differential expression of protein coding ENSGs (Ensembl IDs) | When to biomaRt?
Suggesting changing the "reply-to" field to the mailing list address.
Answer: UniProt.ws query for single UniRef90 ID takes several minutes
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