Showing : Software • reset
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News: Bioconductor 3.20 is Released!
Bioconductor Release Software
4 months ago shepherl 4.1k
0
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11
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1.8k
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News: List of Deprecated Packages for Bioc3.19
Release Devel ExperimentData Software
12 months ago • updated 4 months ago shepherl 4.1k
3
votes
3
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1.5k
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News: Bioconductor 3.20 Release Schedule
software release Release
updated 4 months ago by 52k • written 6 months ago by 4.1k
0
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1
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1.2k
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Job: Research software engineer at UPF Barcelona
JobPosting Devel GSVA Software
written 2.3 years ago by ★ 3.4k
4
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0
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1.0k
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News: Bioconductor 3.19 is Released!
Release Bioconductor Packages Software
10 months ago shepherl 4.1k
0
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1
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1.1k
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News: Bioconductor 3.19 Release Schedule
Release release Software
12 months ago • updated 11 months ago shepherl 4.1k
5
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1
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1.4k
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News: Bioconductor 3.18 is Released!
Packages Bioconductor Release Software
written 16 months ago by 4.1k
2
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1
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1.9k
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Software Compatibility Issue Between phyloseq and lme4 Packages
phyloseq microbiome Software
updated 17 months ago by ★ 4.7k • written 18 months ago by ▴ 10
0
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0
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1.2k
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News: Bioconductor 3.18 Release Schedule
Release Software release
18 months ago shepherl 4.1k
0
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1
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646
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Generate false reads for testing
mgu74bv2cdf Software Alignment
updated 21 months ago by 68k • written 21 months ago by • 0
1
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8
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1.8k
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News: Final List of Deprecated Package Bioc 3.9
deprecation release software experimentData News
written 6.0 years ago by 4.1k
0
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0
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986
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News: Bioconductor 3.17 is Released!
Packages Release Bioconductor Software
22 months ago shepherl 4.1k
0
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0
replies
873
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News: Bioconductor 3.17 Release Schedule
Softwar Release Bioconductor release Software
24 months ago shepherl 4.1k
3
votes
6
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1.5k
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News: Bioconductor will rename the default branch on `git.bioconductor.org` to `devel`
Software Bioconductor Devel devel
updated 23 months ago by • 0 • written 2.0 years ago by 4.1k
1
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0
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1.2k
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News: Bioconductor 3.16 is Released!
Release Packages Bioconductor Software
2.4 years ago shepherl 4.1k
0
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0
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981
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News: New Package Submission Deadline Tomorrow for Bioconductor 3.16
Release Devel Bioconductor Software
2.4 years ago shepherl 4.1k
8
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0
replies
1.2k
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News: Bioconductor 3.15 is Released!
Software Release Packages Bioconductor
2.9 years ago • updated 2.8 years ago shepherl 4.1k
0
votes
0
replies
855
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News: New Package Submission Deadline Tomorrow for Bioconductor 3.15
Release Software Bioconductor Devel
2.9 years ago shepherl 4.1k
0
votes
5
replies
1.7k
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News: Final List of Deprecated Packages for Bioc3.14
ExperimentData Deprecation Software Release Workflow
3.4 years ago • updated 2.9 years ago shepherl 4.1k
8
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0
replies
1.2k
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News: Bioconductor 3.14 is Released!
release Packages Software Release Bioconductor
3.4 years ago shepherl 4.1k
0
votes
0
replies
1.2k
views
Job: Hiring Bioinformaticians, Data Engineers, & Computer Scientists @ Flagship Labs 77
data immunology software vaccinology
3.5 years ago Daniel • 0
5
votes
0
replies
1.2k
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News: Bioconductor 3.13 is Released!
Release Bioconductor Packages Software
3.8 years ago shepherl 4.1k
2
votes
2
replies
1.8k
views
News: Final List of Deprecated Packages for Bioc3.13
Workflow Software ExperimentData Deprecation
4.3 years ago • updated 3.8 years ago shepherl 4.1k
4
votes
0
replies
1.2k
views
News: Bioconductor 3.12 is Released!
Software release Bioconductor Packages Release
4.4 years ago shepherl 4.1k
1
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2
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1.7k
views
News: Final List of Deprecated Packages for Bioc3.12
annotation software experimentdata deprecated News
4.4 years ago shepherl 4.1k
0
votes
0
replies
1.3k
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Job: R programmer position in genetic epidemiology/bioconductor
genetics genomics software Job
4.4 years ago Vincent J. Carey, Jr. 6.7k
2
votes
4
replies
1.5k
views
Bioconductor package development
package R software development
updated 4.4 years ago by 25k • written 4.4 years ago by • 0
3
votes
0
replies
1.8k
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News: List of Deprecated Packages for Bioc3.12
annotation software experiment data deprecated News
4.5 years ago • updated 4.4 years ago shepherl 4.1k
0
votes
2
replies
1.0k
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What is Software, Annotationdata, Experimentdata and workflow category?
Software annotation experiment workflow
updated 4.6 years ago by 4.1k • written 4.6 years ago by • 0
0
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0
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1.2k
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News: List of Deprecated Packages for Bioc3.12
deprecated experiment data software annotation News
4.8 years ago shepherl 4.1k
0
votes
2
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1.0k
views
Problem in dowloading "TxDb.Hsapiens.UCSC.hg38.knownGene"
annotation software TxDb
updated 4.8 years ago by 68k • written 4.8 years ago by • 0
0
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3
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1.3k
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News: Final List of Deprecated Packages for Bioc3.11
software annotation experiment data deprecated News
updated 4.9 years ago by ▴ 160 • written 4.9 years ago by 4.1k
4
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0
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1.0k
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News: Bioconductor 3.11 is Released!
software bioconductor release packages News
4.9 years ago shepherl 4.1k
0
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0
replies
1.2k
views
News: List of Deprecated Packages Bioc 3.11
annotation experimentdata software release deprecation News
5.0 years ago shepherl 4.1k
0
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1
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1.1k
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News: List of Deprecated Packages Bioc 3.11
annotation experimentdata software release deprecation News
5.2 years ago shepherl 4.1k
1
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1
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1.3k
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How to use ENCprime via coRdon with a custom background sequence set?
software codon usage bias dna
updated 5.3 years ago by ▴ 10 • written 5.3 years ago by ▴ 40
0
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0
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1.1k
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News: List of Deprecated Packages Bioc 3.11
annotation experimentdata software release deprecation News
5.3 years ago shepherl 4.1k
0
votes
2
replies
2.1k
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News: Final List of Deprecated Packages for Bioc3.10
annotation experimentdata deprecation release software News
5.4 years ago • updated 5.3 years ago shepherl 4.1k
2
votes
2
replies
1.3k
views
News: Bioconductor Devel 3.11 Notification
software bioconductor packages reports News
5.3 years ago shepherl 4.1k
6
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0
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1.1k
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News: Bioconductor 3.10 is released!!
release software packages bioconductor News
5.4 years ago shepherl 4.1k
0
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0
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1.1k
views
News: List of Deprecated Packages Bioc 3.10
annotation experimentdata software release deprecation News
5.5 years ago • updated 5.4 years ago shepherl 4.1k
2
votes
0
replies
2.6k
views
Job: Bioconductor infrastructure for the integration of genomics, transcriptomics and proteomics data
proteomics genomics transcriptomics software Job
5.5 years ago Laurent Gatto 1.6k
0
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1
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1.3k
views
News: List of Deprecated Packages Bioc 3.10
annotation experimentdata software deprecation release News
5.6 years ago • updated 5.5 years ago shepherl 4.1k
0
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0
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970
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Job: Software Developer - BC Cancer Research Center, Vancouver BC
software bioinformatics sequecing Job
5.7 years ago jmaanaki • 0
0
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3
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1.3k
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News: List of Deprecated Packages Bioc 3.10
annotation experimentdata software release deprecation News
5.8 years ago shepherl 4.1k
0
votes
1
reply
1.1k
views
News: Initial List of Deprecated Packages Bioc 3.10
software experimentdata release deprecation annotation News
5.8 years ago shepherl 4.1k
0
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1
reply
1.5k
views
News: List of Deprecated Package Bioc 3.9
deprecate release devel software experimentdata News
6.0 years ago shepherl 4.1k
0
votes
1
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1.4k
views
Meta_analysis of different platforms of microarray data
microarray meta analysis cancer Software R
updated 6.2 years ago by 68k • written 6.2 years ago by • 0
0
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1
reply
1.3k
views
News: List of Deprecated Package Bioc 3.9
deprecate release software devel News
6.2 years ago shepherl 4.1k
0
votes
0
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1.3k
views
News: DEADLINE: All packages to pass R CMD build and R CMD check
release software experimentdata workflows News
6.9 years ago shepherl 4.1k
50 results • Page 1 of 1
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Comment: sesameDataCache is not work properly on my system by Samreen • 0
Any luck with this? I have tried all of the above and it still doesn't work. This is my session info and I'm on a cluster computing environ…
Answer: Using tximport for kallisto aligned TOIL data by James W. MacDonald 68k
If you just have the transcript data, you probably don't need (and maybe cannot use) `tximport`. Instead you could just do the naive thing …
Answer: Reading gene expression data in GPR format and converting it to xlsx format by James W. MacDonald 68k
Setting aside the inadvisability of putting these data into Excel (and I should point out that these data are not single-cell, but instead …
Comment: concentration tables suitable as input for new packages? by wilkinson • 0
I am grateful for your response. Software such as "Spectra" may parse MS-data to generate tables of concentrations, for instance. But inste…
Comment: Removing UTR from GTF for gene quantification by ATpoint ★ 4.7k
Consider asking at biostars or bioinformatics reddit, since this is not directly related to a Bioconductor problem. Anyway, a couple of th…
Votes
Answer: Differential expression of proteins using somascan data
Answer: Surprising behavior for DEXseq dispersion estimate plot?
Answer: Handle zero effective gene length when tximport RSEM results
Handle zero effective gene length when tximport RSEM results
How to remove genes with 0 counts in tximport?
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