Bioconductor RefSeq

Showing : RefSeq • reset

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895

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refseq Bioconductor conversion

3.6 years ago heiko_kin ▴ 60

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548

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RefSeq Chromosome Mutalyzer

4.2 years ago heiko_kin ▴ 60

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2.0k

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tximport Gene IDs txdb RefSeq Salmon

updated 4.4 years ago by Michael Love 42k • written 4.4 years ago by holmkn • 0

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2.9k

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edgeR ENEMBL RefSeq

updated 5.3 years ago by Gordon Smyth 51k • written 5.3 years ago by mzillur • 0

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2.6k

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genomicfeatures maketxdbfromucsc refseq

updated 8.0 years ago by Hervé Pagès 16k • written 8.0 years ago by Sebastien Vigneau ▴ 10

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3.6k

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ncbi refseq maketxdbfromgff fetchExtendedChromInfoFromUCSC genomeinfodb

updated 8.5 years ago by Hervé Pagès 16k • written 8.5 years ago by gokcen.eraslan ▴ 10

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2.7k

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promoter granges refseq ucsc organismdb

updated 8.6 years ago by Robert Castelo ★ 3.3k • written 8.6 years ago by efoss ▴ 10

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3.8k

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refseq annotationhub

updated 8.8 years ago by Martin Morgan 25k • written 8.8 years ago by dalloliogm ▴ 50

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1.7k

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customprodb dbsnp refseq varianttools

updated 9.0 years ago by xiaojing.wang ▴ 50 • written 9.0 years ago by kristenbeck527 • 0

9 results • Page 1 of 1

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Comment: Ranking the GSEA Results by Lluís Revilla Sancho ▴ 730

You can have the ranking without the cutoff. If you don't keep any gene set after the cutoff then there is nothing to rank as you said, so…

Answer: Create a Graph w/ Only the Genes Interaction by Antonio • 0

Thank you all, I solved my issue by creating a for loop. Cheers!

Comment: Ranking the GSEA Results by alserg ▴ 270

Apparently, it sends a notification to the developer on a new message after the tags were updated :) but not the change of tags itself

Comment: Ranking the GSEA Results by alserg ▴ 270

Where did you see ranking of genes by `log2FC * (-log10 p-value)`? I don't think I ever saw one and not sure what it should achieve. Aren't…

Comment: Trouble Installing DADA2 (warning: R new user) by shepherl 3.9k

As far as this ERROR for Bioc requires R version, Bioconductor is closely tied to an R release. Depending if you tried to use a premade s…

Votes

Comment: Ranking the GSEA Results

Error in `$<-.data.frame`(`*tmp*`, "dispersion", value = NA)

ChiPseeker package: plotAnnoPie identical colors for peakAnnoList features

Comment: How to get the DMR?

Answer: Using both voom and removeBatchEffect, will they double adjust the data or is it

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Popular Question to mohammedtoufiq91 ▴ 10