Bioconductor RNASeqRData

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microRNA gene RNASeqRData edgeR geneontology

2.4 years ago faiza • 0

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939

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find RNASeqRData

updated 2.4 years ago by ATpoint ★ 4.7k • written 2.4 years ago by yuhang • 0

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RNASeqRData TPM

updated 2.4 years ago by ATpoint ★ 4.7k • written 2.4 years ago by prashali.bansal ▴ 10

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632

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RNASeq RNASeqData RNASeqRData

2.5 years ago marymshahi2021 • 0

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821

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RNAseqRData DeSeq2

updated 2.9 years ago by Michael Love 43k • written 2.9 years ago by Hannah • 0

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4.2k

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RNASeqRData

updated 3.0 years ago by Michael Love 43k • written 3.0 years ago by beslinail • 0

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RNASeqRData edgeR RNASeqR RNASeqData

updated 3.0 years ago by Gordon Smyth 52k • written 3.0 years ago by vikycairoli • 0

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1.2k

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RNASeqRData combat_Seq BatchEffect

3.4 years ago • updated 3.2 years ago zeegzaag • 0

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1.1k

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RNASeqRData limma RNASeq RNASeqR

updated 3.9 years ago by Gordon Smyth 52k • written 3.9 years ago by Rita • 0

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3.3k

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RNASeqRData GO

4.0 years ago Wuschel ▴ 10

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960

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RNAinteract rnaseqGene RNASeqRData rnaseqcomp

4.1 years ago Bogdan ▴ 670

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1.4k

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Deseq2 RNASeqRData unbalancedsamplesize

updated 2.8 years ago by Michael Love 43k • written 4.1 years ago by Cihat • 0

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2.5k

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RiboProfiling DESeq2 Bioconductor RNASeqRData

updated 2.4 years ago by Kevin Blighe ★ 4.0k • written 4.1 years ago by Taufiq • 0

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Comment: error in ChAMP loading file by shocked.tick.zyet • 0

Great troubleshooting steps for ChAMP import issues! "ChAMP methylation data import errors" on [Google Search][1] for similar cases. Header…

Comment: orgDB by jenniferping36 • 0

Thanks for the suggestion! I'll check out the resources.

Comment: sesameDataCache is not work properly on my system by Samreen • 0

Any luck with this? I have tried all of the above and it still doesn't work. This is my session info and I'm on a cluster computing environ…

Answer: Using tximport for kallisto aligned TOIL data by James W. MacDonald 68k

If you just have the transcript data, you probably don't need (and maybe cannot use) `tximport`. Instead you could just do the naive thing …

Answer: Reading gene expression data in GPR format and converting it to xlsx format by James W. MacDonald 68k

Setting aside the inadvisability of putting these data into Excel (and I should point out that these data are not single-cell, but instead …

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Answer: Differential expression of proteins using somascan data

Answer: Surprising behavior for DEXseq dispersion estimate plot?

Answer: Handle zero effective gene length when tximport RSEM results

Handle zero effective gene length when tximport RSEM results

How to remove genes with 0 counts in tximport?

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