Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
Qsea
•
reset
0
votes
0
replies
107
views
QSEA- Extraction of Normalized methylation across the samples
qsea
ngsReports
correlation
6 weeks ago
Researcher
• 0
0
votes
1
reply
225
views
Sample-specific methylation values using QSEA
DNAMethylation
cfMeDIP-seq
cfDNA
qsea
updated 3 months ago by
Simon Pearce
• 0 • written 4 months ago by
User3088
• 0
7
votes
18
replies
3.1k
views
Generation of QSEA TCGA 450K Human Methylation Calibration Dataset
illimina 450k methylation
qsea
MEDIPS
TCGA
updated 6 months ago by
Matthias Lienhard
▴ 240 • written 7.2 years ago by
justinburgener
▴ 20
2
votes
1
reply
549
views
QSEA: normalisation >> sequencing preference
qsea
updated 16 months ago by
Matthias Lienhard
▴ 240 • written 16 months ago by
a.riediger
▴ 20
1
vote
1
reply
680
views
Manual import of CNV data (created with IchorCNA) into QSEAsest wit addCNV()
ichorCNA
qsea
updated 16 months ago by
Matthias Lienhard
▴ 240 • written 16 months ago by
a.riediger
▴ 20
1
vote
4
replies
1.2k
views
QSEA: choose appropriate reference for TMM normalisation with qsea::addLibraryFactors / qsea::estimateLibraryFactors
TMM
edgeR
qsea
MEDIPS
updated 21 months ago by
Simon Pearce
• 0 • written 21 months ago by
a.riediger
▴ 20
0
votes
2
replies
888
views
MBD-seq non model species
MethylSeq
ramwas
MEDIPS
qsea
updated 22 months ago by
Simon Pearce
• 0 • written 23 months ago by
Marianna
▴ 20
3
votes
8
replies
1.5k
views
Annotation using QSEA package
DNAMethylation
QSEA
MEDIP
3.0 years ago
rtrivedi1
▴ 10
7
votes
9
replies
1.7k
views
QSEA : Internal CNV analysis and cancer type-specific TCGA 450K Human Methylation Calibration Dataset
MEDIP-seq
CNV
TCGA450KHumanMethylationCalibrationDataset
qsea
PRAD
3.1 years ago
rtrivedi1
▴ 10
0
votes
1
reply
670
views
No beta scores generated in samples eluted at low salt concentration (MBD-seq) which aims to capture low methylated fragments?
qsea
updated 3.1 years ago by
Matthias Lienhard
▴ 240 • written 3.3 years ago by
el466
• 0
0
votes
1
reply
890
views
addPatternDensity in 'qsea' takes too much time
MBD-seq
qsea
BiocParallel
updated 3.5 years ago by
Matthias Lienhard
▴ 240 • written 3.5 years ago by
mbk0asis
• 0
0
votes
2
replies
800
views
Qsea - plotCoverage
Qsea
updated 4.2 years ago by
Matthias Lienhard
▴ 240 • written 4.2 years ago by
gaurav4thareja
▴ 20
1
vote
2
replies
1.0k
views
Read counts between QSEA and MEDIPs
qsea
medips
updated 4.3 years ago by
Matthias Lienhard
▴ 240 • written 4.4 years ago by
Simon Pearce
• 0
0
votes
1
reply
717
views
Qsea - addEnrichmentParameters() - Using INPUT Samples
Qsea
updated 4.4 years ago by
Matthias Lienhard
▴ 240 • written 4.4 years ago by
gaurav4thareja
▴ 20
0
votes
2
replies
1.1k
views
MBDseq analysis using qsea package
qsea
MBDseq
updated 4.8 years ago by
Matthias Lienhard
▴ 240 • written 4.9 years ago by
LNathanson
• 0
0
votes
0
replies
1.0k
views
Indexing large chromosomes (like wheat) bam files in Rsamtools
Rsamtools
QSEA
MEDIPS
5.7 years ago
saripalligautam86
▴ 10
0
votes
1
reply
893
views
Error running the addCoverage command in QSEA with a custom BSGenome reference
qsea
updated 6.1 years ago by
Matthias Lienhard
▴ 240 • written 6.1 years ago by
apt.university
• 0
0
votes
8
replies
1.6k
views
qsea non-TCGA 450K Human Methylation Calibration Dataset
qsea
updated 6.2 years ago by
Matthias Lienhard
▴ 240 • written 6.2 years ago by
wildist
• 0
0
votes
3
replies
1.2k
views
QSEA: Need help on creating ROI for whole genome MeDIPSeq data
qsea
updated 6.4 years ago by
Matthias Lienhard
▴ 240 • written 6.4 years ago by
geekyvt
• 0
1
vote
2
replies
1.0k
views
QSEA: Error while addLibraryFactors
QSEA
updated 6.4 years ago by
Matthias Lienhard
▴ 240 • written 6.4 years ago by
geekyvt
• 0
1
vote
3
replies
1.3k
views
QSEA Error while loading the bam files
qsea
updated 6.4 years ago by
Matthias Lienhard
▴ 240 • written 6.4 years ago by
geekyvt
• 0
21 results • Page
1 of 1
Recent ...
Replies
Comment: Epicv2 conversion fail
by
Alex
• 0
Thank you for your support. > In the double conversion, the output you supplied indicates that the number of probes is the same (453093)? …
Comment: OST to PST Converter Software
by
Deepak
• 0
One can also check out a professional solution named Weeom OST to PST Converter Software. It is a reliable and secure solution to repair co…
Comment: How to search Pubmed Central or other fulltext literature base using regex?
by
Abiologist
• 0
Apologies - you are potentially correct (assuming there is no answer within Bioconductor). I'm having trouble finding a suitable venue for …
Comment: How to search Pubmed Central or other fulltext literature base using regex?
by
ATpoint
★ 4.2k
This is off-topic as entirely unrelated to Bioconductor. You seem to be crossposting this to > 1 community, please at least leave a link to…
Comment: Struggling to convert a large list of non-model genes into human orthologs, any
by
ronin
• 0
Thank you very much for your detailed reply, this was a big help. Just in case others come across this problem in the future, the code did …
Votes
C: ChiPseeker package: plotAnnoPie identical colors for peakAnnoList features
Help with error running DiffBind
Comment: Difference between enrichGO results and Enrichr website results
A: Unable to install the package "tissuesGeneExpression"
Unable to install the package "tissuesGeneExpression"
Awards
• All
Popular Question
to
Jitendra
▴ 10
Popular Question
to
shepherl
3.9k
Popular Question
to
kyliecode
• 0
Popular Question
to
Chris
▴ 20
Popular Question
to
Gordon Smyth
51k
Locations
• All
Philippines,
8 minutes ago
United states,
30 minutes ago
United Kingdom,
30 minutes ago
Bangladesh,
35 minutes ago
France,
42 minutes ago
Traffic: 822 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6