updated 15 months ago by
James W. MacDonald
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written 15 months ago by
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Comment: How to compare subset of samples from VCF files
by
Gordon Smyth
50k
Welcome to Bioconductor support.
Did you know that you can delete your old postings if they haven't received an answer yet? Instead of ap…
Comment: How to compare subset of samples from VCF files
by
Marco
•
0
Here's the vcf file as code block
```
##fileformat=VCFv4.2
##INFO=<ID=DP,Number=1,Type=Integer,Description="Approximate read depth">
##FOR…
Comment: Gviz and custom database
by
James W. MacDonald
66k
The vignette for `Gviz` says you can use a `DNAStringSet`, generated using `Biostrings`. Have you tried that?
Comment: Gviz and custom database
by
luigi.faino
•
0
Dear,
this is not what I need. I need to transform a fasta sequence in a genome track usable in Gviz.
L
Answer: Gviz and custom database
by
James W. MacDonald
66k
https://bioconductor.org/packages/release/bioc/vignettes/txdbmaker/inst/doc/txdbmaker.html
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