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updated 4.9 years ago by
Gordon Smyth
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written 4.9 years ago by
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7.1 years ago • updated 7.0 years ago
Luo Weijun
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Comment: How to compare subset of samples from VCF files
by
Gordon Smyth
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Welcome to Bioconductor support.
Did you know that you can delete your old postings if they haven't received an answer yet? Instead of ap…
Comment: How to compare subset of samples from VCF files
by
Marco
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0
Here's the vcf file as code block
```
##fileformat=VCFv4.2
##INFO=<ID=DP,Number=1,Type=Integer,Description="Approximate read depth">
##FOR…
Comment: Gviz and custom database
by
James W. MacDonald
66k
The vignette for `Gviz` says you can use a `DNAStringSet`, generated using `Biostrings`. Have you tried that?
Comment: Gviz and custom database
by
luigi.faino
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0
Dear,
this is not what I need. I need to transform a fasta sequence in a genome track usable in Gviz.
L
Answer: Gviz and custom database
by
James W. MacDonald
66k
https://bioconductor.org/packages/release/bioc/vignettes/txdbmaker/inst/doc/txdbmaker.html
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