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OmicCircos
•
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0
votes
0
replies
746
views
Question about OmicCircos
OmicCircos
6.7 years ago
ch8316f5eyu
• 0
0
votes
0
replies
1.1k
views
Synteny plots with OmicCircos or Rcircos
omiccircos
rcircos
7.3 years ago
mictadlo
▴ 10
0
votes
0
replies
1.1k
views
Omiccircos: how to draw a circos plot for non-model organisms
omiccircos
seganglepo
sim.circos
circos
7.3 years ago
Didi
▴ 10
2
votes
3
replies
3.8k
views
Making a circos plot to show expression for a gene set rather than whole genome
Gene set
gene set analysis
omiccircos
updated 7.4 years ago by
yifangt
▴ 20 • written 10.0 years ago by
Peter.Wood
• 0
0
votes
0
replies
1.4k
views
OmicCircos: included UCSC.hg19.chr dataframe is actually hg18 cytobands
omiccircos
bug
hg19
hg18
data
7.6 years ago
matthew.bashton
• 0
0
votes
1
reply
1.8k
views
Circos Tile colors
OmicCircos
RCircos
updated 7.7 years ago by
bernatgel
▴ 150 • written 7.7 years ago by
Radek
▴ 90
0
votes
1
reply
2.5k
views
OmicCircos - Error in 1:scale.n : NA/NaN argument
OmicCircos
7.8 years ago
Stefan Langenberg
• 0
0
votes
0
replies
1.2k
views
OmicCircos Error in Colnames attribute mus be the same length as the vector
r
omiccircos
7.9 years ago
theobroma22
▴ 10
0
votes
0
replies
1.4k
views
OmicCircos barplot height and scale
omiccircos
8.0 years ago
Miss Agnieszka Aleksandra Golicz
▴ 40
0
votes
0
replies
896
views
OmicCircos for non human genomes
omiccircos
rnaseq
plants
8.0 years ago
Didi
▴ 10
0
votes
0
replies
990
views
Zoom function in OmicCircos
OmicCircos
Zoom
8.0 years ago
abmora
• 0
0
votes
0
replies
902
views
How to plot a single segment using OmicCircos?
omiccircos
8.4 years ago
Shambho
• 0
1
vote
0
replies
884
views
the 23re and 24th segs cannot be plotted
OmicCircos
8.5 years ago
magcj89
▴ 10
3
votes
2
replies
2.8k
views
How to represent a relationship between physical map and linkage map of a sequenced data using OmicCircos or another similar
omiccircos
software R
bioconductor for genomic data science
linkage disequilibrium
updated 8.8 years ago by
Hu, Ying NIH/NCI [E]
▴ 50 • written 8.8 years ago by
pertille
• 0
0
votes
0
replies
1.5k
views
Can OmicCircos handle chicken ChIA-PET interactome?
OmicCircos
chicken
9.0 years ago
Gary
▴ 20
0
votes
0
replies
1.6k
views
Circos Styling plots is now easy with canceR package
canceR
visualization
omiccircos
9.6 years ago
kmezhoud
▴ 10
0
votes
0
replies
1.5k
views
News:
OmicCircos was updated
visualization
omiccircos
News
9.8 years ago
Hu, Ying NIH/NCI [E]
▴ 50
1
vote
3
replies
1.6k
views
OmicCircos mapping data file.
omiccircos
updated 9.8 years ago by
Hu, Ying NIH/NCI [E]
▴ 50 • written 10.2 years ago by
abdul rawoof
▴ 60
0
votes
1
reply
1.9k
views
extdata missing for non-human OmicCircos plots?
OmicCircos
updated 9.8 years ago by
Hu, Ying NIH/NCI [E]
▴ 50 • written 10.2 years ago by
micahgearhart
• 0
0
votes
2
replies
2.2k
views
How to specifiy colors for polygon links when using circos function of OmicCircos package
graph
omiccircos
updated 9.8 years ago by
Hu, Ying NIH/NCI [E]
▴ 50 • written 9.8 years ago by
wei.shen
• 0
0
votes
1
reply
1.5k
views
Larger values masking others for OmicCircos heatmap
differential gene expression
heatmap
Circos
omiccircos
10.0 years ago
Peter.Wood
• 0
21 results • Page
1 of 1
Recent ...
Replies
Comment: Any tools to convert .gff to .gtf format
by
ControlF5
• 0
Yes, the Appsierra team recently built a tool to convert .gff to .gtf format. [ControlF5][1] is providing the best software testing service…
Comment: EuroBioC2024 abstract submission is open!
by
Alan Downey
• 0
EuroBioC2024 has opened its abstract submission process, presenting an exciting opportunity for researchers to contribute to groundbreaking…
Comment: ChAMP.DMR error - Error in makeGenomicRatioSetFromMatrix
by
O'Brien
• 0
Consult the ChAMP.DMR documentation for more information on supported array types and expected data formats: https://bioconductor.org/packa…
Answer: combining raw counts and estimated counts
by
O'Brien
• 0
It is possible to combine raw counts from TCGA and estimated counts from GEO datasets (Kalisto pseudoalignment) while mitigating batch effe…
Comment: Packages don't update, but no error or warning is thrown
by
neighsanlo
• 0
@[sandtrix][1] This is useful information. [1]: https://sandtrix.io
Votes
A: GWAS analysis with Illumina HumanOmni5-4 BeadChip - recommended software and wor
A: GWAS analysis with Illumina HumanOmni5-4 BeadChip - recommended software and wor
A: RNA-seq Normalisation - normalise all samples in experiment or only the ones use
Answer: Can DESeq2's design compensate for sequencing experimental design shortcomings?
Comment: Issues with seqlevelsStyle when making custom txdb objects for genomes/annotatio
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