Showing : Heatmaps • reset
0
votes
2
replies
236
views
DESeq2 Heatmap
heatmaps
updated 11 days ago by ★ 1.4k • written 12 days ago by • 0
0
votes
3
replies
520
views
Label specific rows in pheatmap
heatmaps pheatmap
updated 3 months ago by 67k • written 3 months ago by ▴ 50
1
vote
5
replies
1.3k
views
Heatmap from the output of GSEA clusterProfiler?
clusterProfiler heatmaps
written 5 months ago by • 0
2
votes
1
reply
690
views
DESeq2 is it OK to scale transformed data in order to plot heatmaps?
DESeq2 heatmaps
updated 5 months ago by ★ 4.6k • written 5 months ago by • 0
0
votes
0
replies
258
views
Error in drawHeatmap function
GeneOverlap heatmaps
7 months ago Johanna • 0
0
votes
2
replies
757
views
Cluster columns in Pheatmap
geneexp pheatmap heatmaps cluster
updated 8 months ago by 67k • written 8 months ago by • 0
0
votes
1
reply
1.7k
views
Error when trying to create a heatmap with DESeq2
Heatmap RNA-seqanalysis heatmaps DESeq2
updated 15 months ago by ▴ 780 • written 15 months ago by • 0
0
votes
1
reply
1.9k
views
edgeR heatmap construction and interpretation
heatmaps
updated 15 months ago by 52k • written 15 months ago by • 0
0
votes
3
replies
994
views
Installing Gpart
gpart heat heatmaps
updated 15 months ago by 67k • written 15 months ago by • 0
0
votes
2
replies
1.0k
views
Drawing a heatmap with only limited genes
heatmaps
updated 19 months ago by • 0 • written 19 months ago by • 0
1
vote
1
reply
724
views
Add 'ColSideColors' using 'heatmap.2' function
ColSideColors heatmaps heatmap.2
updated 22 months ago by ▴ 80 • written 22 months ago by ▴ 10
0
votes
1
reply
909
views
Heatmap of two conditions from the normalized gene count data
GeneExpression heatmaps
updated 22 months ago by ★ 4.6k • written 23 months ago by • 0
0
votes
2
replies
1.4k
views
How to use the plotExprHeatmap function to draw heat maps according to groups
grou heatmaps CyTOFpower cytofWorkflow
23 months ago shuangshuang • 0
0
votes
0
replies
1.2k
views
WGCNA Heatmap and Export to Cytoscape Not Working
Cytoscape Heatmap heatmaps WGCNA
24 months ago gianni.drm • 0
0
votes
1
reply
937
views
struggling to create a heatmap
DESeq2 heatmaps
updated 24 months ago by ★ 4.6k • written 24 months ago by ▴ 10
2
votes
3
replies
1.5k
views
How can I draw a barplot of complexheatmap according 'Tumor Type'
heatma heatmaps ComplexHeatmap
updated 2.0 years ago by ▴ 40 • written 2.0 years ago by ▴ 10
2
votes
2
replies
912
views
[DESeq2] There is no difference in expression in my heatmap
DESeq2 heatmaps
2.0 years ago Sooni ▴ 10
4
votes
5
replies
5.1k
views
How to identify top most variable genes from log2 normalized data?
supervised edgeR variance RNASeq heatmaps
updated 23 months ago by 52k • written 2.1 years ago by ▴ 10
2
votes
5
replies
2.2k
views
ComplexHeatmap - z-score color coding failed
heatmaps ComplexHeatmap
2.1 years ago Katharina • 0
0
votes
1
reply
3.4k
views
Heatmap with result DESeq analysis
DESeq2 results Heatmaps plots
updated 2.3 years ago by 43k • written 2.3 years ago by • 0
0
votes
3
replies
1.7k
views
Generate Heatmap from Gene Names after DESEQ2
DESeq2 DESEQ2 tximeta SummarizedExperiment heatmaps
updated 2.4 years ago by 67k • written 2.4 years ago by • 0
0
votes
1
reply
2.0k
views
Complex Heatmap - correlation matrix - how to have exact same annotation with same colors for rows and columns?
R heatmaps ComplexHeatmap Heatma
updated 2.4 years ago by ▴ 290 • written 2.4 years ago by • 0
1
vote
1
reply
1.3k
views
How fix lines of dendrogram that overlap in the column portion of a heatmap?
heat heatmaps
updated 2.6 years ago by 67k • written 2.6 years ago by • 0
0
votes
2
replies
5.9k
views
Scaling for p.heatmap
heatmaps pheatmap scaling
2.6 years ago Bhavana • 0
0
votes
3
replies
1.6k
views
Persisting error in making a heatmap
heatmaps gplots
2.6 years ago beslinail • 0
1
vote
1
reply
1.0k
views
Method for generating heatmap of overlapping DEGs?
heatm heatmaps
updated 2.8 years ago by 67k • written 2.8 years ago by • 0
0
votes
1
reply
1.4k
views
Help me do a gene enrichment analysis
DESeq2 topGO heatmaps
updated 3.4 years ago by ▴ 40 • written 3.4 years ago by • 0
0
votes
2
replies
2.0k
views
PCA and heatmaps: most variable genes selection
DESeq2 ExpressionData heatmaps pca
3.6 years ago Clara ▴ 10
0
votes
1
reply
3.0k
views
Can you colour dendrogram branch clusters in pheatmap?
R heatmaps pheatmap
updated 3.9 years ago by ★ 4.0k • written 3.9 years ago by ▴ 10
1
vote
1
reply
1.1k
views
PCA rand heatmap of raw data
DESeq2 DiffSeq PrincipalComponent rlog heatmaps
updated 3.9 years ago by 43k • written 3.9 years ago by ▴ 30
4
votes
5
replies
1.7k
views
DEseq2 results
heatmaps DEGs PCA
updated 3.9 years ago by ★ 4.0k • written 3.9 years ago by • 0
0
votes
0
replies
887
views
How to generate input file for Bioconductor package heatmaps
heatmaps input file
updated 5.9 years ago by 67k • written 5.9 years ago by ▴ 10
32 results • Page 1 of 1
Recent ...
Replies
Comment: How to compare expression levels of genes between scRNAseq and bulkRNAseq? by Quang NN ▴ 10
Thank you ATpoint for your response. In bulkRNAseq, I did have two cell types to compare. But, I want to also see if bulkRNAseq might have …
Answer: Postdoc/RA position: Software Engineer For R and High-Performance Computing by alishakhannight • 0
Visit Our Most Popular Call Girls Location in Delhi NCR: https://cg.escortserviceindia.in/blog/delhi/near-me/call-girls/saket https://cg.…
Comment: Postdoc/RA position: Software Engineer For R and High-Performance Computing by alishakhannight • 0
Hi, I am Alisha Khan. I am a Delhi girl who helps you to make your dreams come true. You deserve it! If you want what you are looking for t…
Answer: Why select top highly expressed genes based on normalized counts, but then plot by ATpoint ★ 4.6k
The choice of variable genes is typically part of a QC process. You select genes that in an unbiased fashion (unbiased because variance cal…
Comment: How to compare expression levels of genes between scRNAseq and bulkRNAseq? by ATpoint ★ 4.6k
My take is that RNA-seq (be it bulk or single-cell) is inherently relative. I don't think you can really "compare" the absolute expression …
Votes
A: DESeq2 interaction term
Comment: Recount3 data correspond to TCGA data
Answer: DESeq2- merging technical vs biological replicates
Answer: SingleCellExperiment convenience function for metadata+expression?
How to correct for tumor purity using DESeq2 to analyze TCGA tumor sample expression.
Awards • All
Popular Question to shepherl 4.1k
Popular Question to simon.andrews • 0
Popular Question to Gordon Smyth 52k
Popular Question to ajglajd gajgflkadfj gl • 0
Popular Question to Robert Castelo ★ 3.4k
Locations • All
The Netherlands, 1 minute ago
Germany, 3 minutes ago
United States, 8 minutes ago
United States, 33 minutes ago
United States, 43 minutes ago
Traffic: 905 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6