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FlowCytometry
•
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0
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0
replies
585
views
News:
Online course - FLOW CYTOMETRY DATA ANALYSIS WITH R/BIOCONDUCTOR
Bioconductor
FlowCytometryData
FlowCytometry
12 months ago
info
▴ 10
0
votes
0
replies
589
views
Merging 2 staining panels
FlowCytometry
flowCore
22 months ago
michaela.gregorova13
• 0
2
votes
1
reply
1.2k
views
How to modify a compensation matrix in an fcs file
flowCore
FlowCytometry
2.1 years ago
aguirre
▴ 20
0
votes
0
replies
725
views
How to fix Flow-Data autoplot heat map
FlowCytometry
flowCore
openCyto
ggcyto
2.1 years ago
Dennis.hinkel
• 0
1
vote
1
reply
935
views
creating a NOT gate for gating out a single quadrant in a quadrant gate openCyto
FlowCytometry
Opencyto
updated 2.2 years ago by
Kevin Blighe
★ 4.0k • written 2.2 years ago by
Noël
• 0
0
votes
0
replies
655
views
gate_quad_sequential as parent gate for downstream gating in opencyto CSV template
opencyto
FlowCytometry
2.2 years ago
Noël
• 0
2
votes
9
replies
2.2k
views
Error when plotting flow cytometry data
FlowCytometry
flowCore
ggcyto
updated 2.2 years ago by
SamGG
▴ 360 • written 2.2 years ago by
alex
• 0
0
votes
0
replies
738
views
Reducing/sampling number of FCS events
FlowCytometry
flowCore
3.0 years ago
markkelly1983
▴ 20
0
votes
0
replies
863
views
Job:
Bioconductor developer
FlowCytometry
flowCore
3.0 years ago
markkelly1983
▴ 20
0
votes
1
reply
1.3k
views
[flowSOM] extracting data from tree
flowcytometry
flowSOM
flowSET
flowFrame
5.7 years ago
fabrizio.benedetti.82
• 0
0
votes
6
replies
2.4k
views
spillover::flowCore problem: Error in match(unstained, sampleNames(x))
flowcore
spillover
flowcytometry
updated 6.9 years ago by
Samuel Ahuno
• 0 • written 8.8 years ago by
Daniel Prieto
• 0
0
votes
1
reply
1.3k
views
[flowCore] linearization of logarithmic data seems to be calculated wrong
flowcore
flowcytometry
updated 6.9 years ago by
Jiang, Mike
★ 1.3k • written 6.9 years ago by
max.zhao
• 0
0
votes
1
reply
1.4k
views
Installation of "flowWorkspace" on Ubuntu fails
bioconductor
R
flowcytometry
7.9 years ago
mo
• 0
0
votes
2
replies
2.2k
views
Scaling fcs files with flowCore
flowCore
flowcytometry
8.7 years ago
Jiang, Mike
★ 1.3k
0
votes
1
reply
2.1k
views
FlowWorkspace and norm2Filter
flowcytometry
opencyto
flowworkspace
flowcore
8.8 years ago
Jiang, Mike
★ 1.3k
0
votes
1
reply
1.4k
views
FlowViz package question
flowviz
flowcytometry
8.8 years ago
Jiang, Mike
★ 1.3k
0
votes
1
reply
1.6k
views
read.flowSet error Error: vector::_M_range_check
software error
read.flowset()
read.fcs
flowcore
flowcytometry
8.8 years ago
e.bestion
• 0
1
vote
2
replies
1.4k
views
openCyto - samples with low cell counts
flowcytometry
opencyto
8.9 years ago
Jiang, Mike
★ 1.3k
0
votes
1
reply
1.5k
views
samples are reordered in read.flowSet
flowcore
flowcytometry
9.4 years ago
Jiang, Mike
★ 1.3k
0
votes
2
replies
2.1k
views
xyplot can't find channel (flowViz)
flowcore
flowviz
flowcytometry
updated 9.4 years ago by
Jiang, Mike
★ 1.3k • written 9.4 years ago by
ericjkort
• 0
0
votes
0
replies
1.5k
views
Re: FlowStats help
flowclust
opencyto
flowcytometry
9.8 years ago
Jiang, Mike
★ 1.3k
1
vote
1
reply
1.7k
views
flowCore: using read.FCS with which.lines is not time efficient?
flowcore
read.FCS
flowcytometry
updated 10.0 years ago by
Jiang, Mike
★ 1.3k • written 10.1 years ago by
skiaphrene
▴ 10
4
votes
1
reply
1.9k
views
News:
New Flow Cytometry Data Analysis Framework
flowcore
flowcytometry
opencyto
new
News
10.3 years ago
Greg Finak
▴ 150
0
votes
0
replies
1.3k
views
FlowCore - reading in flowSets
FlowCytometry
PROcess
flowCore
FlowCytometry
PROcess
flowCore
11.9 years ago
Pieter Coussement
▴ 30
24 results • Page
1 of 1
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Replies
Comment: Cross-validation with multiple control subgroups in limma
by
Ali Barry
▴ 40
Thanks so much for taking the time here, the insights are much appreciated. I suspected I'd have to ad hoc compare results if I did repeat …
Answer: Cross-validation with multiple control subgroups in limma
by
Gordon Smyth
52k
limma doesn't do cross-validation or resampling. Like most classical linear modeling procedures in statistics, limma uses a statistical mod…
Comment: Issues with seqlevelsStyle when making custom txdb objects for genomes/annotatio
by
Robert Castelo
★ 3.4k
Hi Hervé, thank you very much for your input into how to properly build and manage TxDb objects. gDNAx has two main inputs, one or more BAM…
Comment: Biostrings: Error writing long reads (>200 kbps) with writeQualityScaledXStringS
by
Aidan
▴ 60
Quick update: this is fixed in a branch awaiting PR to Biostrings (https://github.com/Bioconductor/Biostrings/pull/122). Should be in `deve…
Answer: Can DESeq2's design compensate for sequencing experimental design shortcomings?
by
Michael Love
43k
For statistical analysis plans, I recommend working with a local statistician or someone familiar with linear models in R. I have to reserv…
Votes
Answer: Can DESeq2's design compensate for sequencing experimental design shortcomings?
Comment: Issues with seqlevelsStyle when making custom txdb objects for genomes/annotatio
C: edgeR and lack of counts ID on CPM matrix
A: DESeq2 Following RSEM
A: importing RSEM data into DESeq2
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