Showing : FlowCytometry • reset
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Trouble with double delimiters in .fcs file (flowCore package)
flowCore FlowCytometry FlowCytometryData
6 weeks ago vpochic • 0
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659
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News: Online course - FLOW CYTOMETRY DATA ANALYSIS WITH R/BIOCONDUCTOR
Bioconductor FlowCytometryData FlowCytometry
14 months ago info ▴ 10
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641
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Merging 2 staining panels
FlowCytometry flowCore
24 months ago michaela.gregorova13 • 0
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1.3k
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How to modify a compensation matrix in an fcs file
flowCore FlowCytometry
2.3 years ago aguirre ▴ 20
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780
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How to fix Flow-Data autoplot heat map
FlowCytometry flowCore openCyto ggcyto
2.3 years ago Dennis.hinkel • 0
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997
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creating a NOT gate for gating out a single quadrant in a quadrant gate openCyto
FlowCytometry Opencyto
updated 2.3 years ago by ★ 4.0k • written 2.3 years ago by • 0
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gate_quad_sequential as parent gate for downstream gating in opencyto CSV template
opencyto FlowCytometry
2.3 years ago Noël • 0
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9
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2.3k
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Error when plotting flow cytometry data
FlowCytometry flowCore ggcyto
updated 2.4 years ago by ▴ 360 • written 2.4 years ago by • 0
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781
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Reducing/sampling number of FCS events
FlowCytometry flowCore
3.1 years ago markkelly1983 ▴ 20
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900
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Job: Bioconductor developer
FlowCytometry flowCore
3.2 years ago markkelly1983 ▴ 20
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1
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1.3k
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[flowSOM] extracting data from tree
flowcytometry flowSOM flowSET flowFrame
5.9 years ago fabrizio.benedetti.82 • 0
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6
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2.5k
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spillover::flowCore problem: Error in match(unstained, sampleNames(x))
flowcore spillover flowcytometry
updated 7.0 years ago by • 0 • written 9.0 years ago by • 0
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1
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1.3k
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[flowCore] linearization of logarithmic data seems to be calculated wrong
flowcore flowcytometry
updated 7.1 years ago by ★ 1.3k • written 7.1 years ago by • 0
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1
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1.4k
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Installation of "flowWorkspace" on Ubuntu fails
bioconductor R flowcytometry
8.0 years ago mo • 0
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2
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2.3k
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Scaling fcs files with flowCore
flowCore flowcytometry
8.9 years ago Jiang, Mike ★ 1.3k
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1
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2.1k
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FlowWorkspace and norm2Filter
flowcytometry opencyto flowworkspace flowcore
9.0 years ago Jiang, Mike ★ 1.3k
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1
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1.4k
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FlowViz package question
flowviz flowcytometry
9.0 years ago Jiang, Mike ★ 1.3k
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1
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1.6k
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read.flowSet error Error: vector::_M_range_check
software error read.flowset() read.fcs flowcore flowcytometry
9.0 years ago e.bestion • 0
1
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2
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1.4k
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openCyto - samples with low cell counts
flowcytometry opencyto
9.1 years ago Jiang, Mike ★ 1.3k
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1
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1.5k
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samples are reordered in read.flowSet
flowcore flowcytometry
9.6 years ago Jiang, Mike ★ 1.3k
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2
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2.2k
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xyplot can't find channel (flowViz)
flowcore flowviz flowcytometry
updated 9.6 years ago by ★ 1.3k • written 9.6 years ago by • 0
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0
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1.5k
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Re: FlowStats help
flowclust opencyto flowcytometry
10.0 years ago Jiang, Mike ★ 1.3k
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1
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1.8k
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flowCore: using read.FCS with which.lines is not time efficient?
flowcore read.FCS flowcytometry
updated 10.1 years ago by ★ 1.3k • written 10.3 years ago by ▴ 10
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1.9k
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News: New Flow Cytometry Data Analysis Framework
flowcore flowcytometry opencyto new News
10.4 years ago Greg Finak ▴ 150
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1.4k
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FlowCore - reading in flowSets
FlowCytometry PROcess flowCore FlowCytometry PROcess flowCore
12.1 years ago Pieter Coussement ▴ 30
25 results • Page 1 of 1
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Answer: cameraPR() non directional test by Gordon Smyth 52k
Yes, you can still do non-directional tests using cameraPR(), but it's not quite as easy as it was using the original camera() function as …
Answer: WGCNA with paired samples by Ivo • 0
You can use batch correction on the person ID and then continue WGCNA as usual using the corrected matrix. You can use e.g. sva::ComBat or …
Answer: Plot title for PCA in DESeq2 by ATpoint ★ 4.7k
The function uses ggplot2, so you need `+ ggtitle('title')`. Please take a ggplot2 tutorial for details.
Comment: DESeq2 It is correct to use interaction term for patient variability? by Bradley • 0
I apologize, but I am still perplexed. I need to know the exact type of replication. Do we have many samples taken from the same tumor? You…
Comment: Differential variance analysis - can i use deseq2 by Michael Love 43k
VST is valid for working with expression data on a variance stabilized scale, so yes. There are many papers that have used VST and then com…
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Comment: Different annotation packages (org.Mm.eg.db, EnsDb.Mmusculus.v79, BiomaRt) retu
Answer: normalizatino of dna methylation EPIC data
Answer: Differential expression of protein coding ENSGs (Ensembl IDs) | When to biomaRt?
Suggesting changing the "reply-to" field to the mailing list address.
Answer: UniProt.ws query for single UniRef90 ID takes several minutes
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