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News: RNA-seq analysis with Bioconductor Carpentries workshop, Boston, Jul 31-Aug 1
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News: Include your Bioconductor tutorial in Smörgåsbord 2023, May 22-26!
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19 months ago Maria Doyle ▴ 90
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News: Bioconductor joins GTN Smörgåsbord online training event, May 22-26, 2023!
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19 months ago Maria Doyle ▴ 90
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News: Translation Hackathon (community event) announcement
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News: BioCAsia Virtual Meeting, 15-18 October 2020
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News: Bioc2020 - Deadline for workshops/talk/poster proposals TODAY!
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4.7 years ago shepherl 4.1k
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News: Bioc2020 - Deadline for workshops/talk/poster TOMORROW
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4.7 years ago shepherl 4.1k
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News: Bioc2020 - Deadline for workshops/talk/poster proposals in ONE week
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4.7 years ago shepherl 4.1k
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News: Bioc2020 - Deadline for workshops/talk/poster proposals in two weeks!
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4.8 years ago shepherl 4.1k
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News: Bioc2020 - Registration - Call for abstracts for workshops/talks/poster - travel and caregiver scholarships
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4.8 years ago shepherl 4.1k
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News: Bioc2020 - Registration Open - Call for abstracts workshops/talks/posters Open
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4.8 years ago shepherl 4.1k
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2018 Toronto Bioconductor Conference registration details?
conference event
updated 7.0 years ago by 25k • written 7.0 years ago by • 0
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Comment: Help with RSEM counts: do I transpose matrix? by NB • 0
OK thank you.
Comment: Help with RSEM counts: do I transpose matrix? by James W. MacDonald 67k
You can ask here, but please read the `DESeq2` vignette first, which should answer most questions.
Comment: Help with RSEM counts: do I transpose matrix? by NB • 0
Thank you. If I have questions about QC/normalization, do I ask them here or ask a new question?
Answer: Help with RSEM counts: do I transpose matrix? by James W. MacDonald 67k
Yes. Samples in columns and genes in rows.
Comment: Issues with BSgenome.Mmusculus.UCSC.mm39 and generating motif matrix in Signac ( by James W. MacDonald 67k
It's not informative except for me to say I was right that it's `getSeq` that is providing the error. It appears that `AddMotifs` is passin…
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Answer: Detecting genomic signatures of drug resistance breast cancer in transcriptom
Comment: Issues with BSgenome.Mmusculus.UCSC.mm39 and generating motif matrix in Signac (
Answer: Issues with BSgenome.Mmusculus.UCSC.mm39 and generating motif matrix in Signac (
Comment: does anyone how to create rarefaction curves from a phyloseq object?
Answer: ANOVA like approach of edgeR
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